KEGG S.frigidimarina: Sfri

Shewanella frigidimarina: Sfri_1637

Entry

Sfri_1637 CDS S.frigidimarina

Definition cytidine deaminase (EC:3.5.4.5)

Orthology K01489 cytidine deaminase [EC:3.5.4.5]

Pathway sfr00240 Pyrimidine metabolism
sfr01100 Metabolic pathways

Class Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:sfr00240]

SSDB

Motif Pfam: dCMP_cyt_deam_2 dCMP_cyt_deam_1
PROSITE: CYT_DCMP_DEAMINASES

Other DBs NCBI-GI: 114562813
NCBI-GeneID: 4277296
JGI: Sfri1637
UniProt: Q083S7

Position complement(1949720..1950616)

AA seq 298 aa
MQNRFLESITQLDKPLANALVPLLHDQFCGHIDASQFAGLVKASGKTEQQVLMDLLPIAA
ALANPPISEFYVGAIAKGSSGDLYMGANLELPGEALFHSVHAEQSAISHAWLSGETEIVD
IIVNFSPCGHCRQFMNELVNGSKINIHLPNQETQTLAHYLPYAFGPSDLDVTVPLLCKRE
QEFNCDSDDPMIIEAIDQMGLSYAPYTNNNAAVVLETNDGATFCGRYAESAAFNPSMQPM
QMALSNLIRNNRQYSEIKRAVLVESSVGKITLVGAAMDALHAIAPIELQHMVVEPLLG

NT seq 897 nt +upstreamnt +downstreamnt
atgcaaaatcgttttttagagagcattactcaactagacaagcctttggccaatgcgctg
gtaccattattacatgaccaattttgcggtcatattgatgcaagtcaatttgcaggccta
gttaaggcaagcggtaaaacagagcaacaagtgcttatggatttattacctattgccgca
gcactcgctaacccaccgataagtgagttttatgtcggcgctattgcaaaaggtagcagt
ggcgacttgtacatgggcgctaatttagaattacccggtgaagcgttatttcacagtgtt
catgcagaacaaagtgccatcagccatgcatggttgagcggtgaaactgaaattgttgat
attattgtaaatttcagcccttgtggtcattgtcgtcaatttatgaacgaactggtcaat
ggtagtaagattaatattcacctgccaaatcaagagacccaaacattagcgcattattta
ccttatgcgtttggaccgtcagacttagatgtgaccgtgccattgctatgtaagcgcgag
caagaatttaattgtgattcagatgacccaatgatcatcgaagccattgatcaaatgggc
ctcagttacgcaccctacactaataataatgcagctgtagtattagaaaccaacgatggc
gccactttctgtggtcgttatgctgaaagtgcggcattcaatccatcaatgcaaccgatg
caaatggctctatccaatttaatccgcaataaccgtcaatacagcgaaataaagcgcgcg
gtattagttgaatcatcagtaggtaaaattaccttggtcggcgcggctatggatgctctg
catgcaattgcaccgattgagcttcaacatatggttgtagagccattgcttggataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SFR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (16)

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