KEGG S.frigidimarina: Sfri

Shewanella frigidimarina: Sfri_1917

Entry

Sfri_1917 CDS S.frigidimarina

Definition catalase/peroxidase HPI (EC:1.11.1.6)

Orthology K03782 catalase/peroxidase [EC:1.11.1.6]

Pathway sfr00380 Tryptophan metabolism
sfr00680 Methane metabolism
sfr01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:sfr00680]
Metabolism; Amino Acid Metabolism; Tryptophan metabolism
[PATH:sfr00380]

SSDB

Motif Pfam: peroxidase
PROSITE: PEROXIDASE_2 PEROXIDASE_4

Other DBs NCBI-GI: 114563088
NCBI-GeneID: 4278829
JGI: Sfri1917
UniProt: Q082Q2

Position complement(2267196..2269412)

AA seq 738 aa
MLFLVIKEPIMDKAQHTQGKCPVAHGGNTTVASDVMEWWPNALNLDILHQHDNKTNPMDP
NFDYREAFKSLDLSAVKQDLRALMTDSKDWWPADWGHYGGLMIRMAWHSAGTYRMADGRG
GAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLIILAGTIAYESMGLKT
FGFAGGRADIWHPEKDIYWGSEKQWLAASDAENSRYSGQRDLENPLAAVMMGLIYVNPEG
VDGQPDPLKTAQDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGRAENLEAAPEGAELE
DQGLGWLNKTSRGIGRDTVTSGIEGAWTTHPTQWDNGYFELLLNYDWELKKSPAGAWQWQ
PINIKEEHKPVDVEDPSIRLSPIMTDADMAMKMDPEYRKISDRFYQDPAYFSEVFARAWF
KLTHRDLGPKSRYLGTDVPAEELIWQDPIPQVDYSLTEQEVTDIKAKILASGLSIAQLVA
TAWDSARTFRGSDFRGGANGARIRLAPQKDWQGNEPARLQKVLAVLATIQAGLTKSVSIA
DLIVLGGTAAVEKAAHAAGVHVKVPFAAGRGDSTLAQTDVESFDVLEPLHDAFRNWQKKD
YVVQPEEMMLDRTQLMGLTAHEMTVLVGGMRVLGANYDNSKHGVFTDNVGVLSNDFFVNL
TDMSYNWKPAGKNLYHIVDRSTDKVKWTATRVDLVFGSNSILRSYAEIYAQDDAKEKFVN
DFVKTWTKVMNADRFDLM

NT seq 2217 nt +upstreamnt +downstreamnt
atgctatttttagtgataaaggaacctatcatggacaaagcacaacatacccaaggcaag
tgcccagtagctcacggtggcaataccacagtcgcaagcgacgtaatggaatggtggcct
aatgcacttaatctcgatattcttcaccagcatgacaataaaaccaatccaatggatcca
aatttcgattatcgcgaagcttttaaaagcctcgacctgtctgcggtaaaacaagatctt
cgcgcgttaatgactgatagtaaagattggtggcctgccgactggggccattatggcggt
ctgatgatccgtatggcttggcactctgctggaacttatcgtatggcagatggacgcggc
ggtgctggaaccggtaatcaacgctttgcgcccctcaacagctggccagataatgccaat
ttagacaaagcacgtagattactgtggccaattaaaaagaaatatggcaataagttatct
tgggcagatttaatcatactcgcaggtactattgcttatgaatcaatgggcttaaaaacc
tttggttttgctggtggccgtgctgatatttggcatccagaaaaagatatttactggggt
tcagaaaaacaatggctggcagcaagcgacgctgaaaatagtcgttactctggacaacgc
gaccttgaaaatccattagctgctgtgatgatggggttaatttatgtcaaccctgaaggt
gtagatggtcaaccggatccgttaaaaactgcacaagacattcgtgtcacctttgaacgc
atggcaatgaatgacgaagaaactgtcgcccttactgctggtggacacactgtcggtaaa
tgtcacggtaatggtcgagcagaaaacctcgaagccgctccagaaggcgcagagcttgaa
gaccaaggtttaggttggttaaacaaaacaagccgcggtattggccgcgatactgtaaca
agtggtattgaaggcgcttggacaacccatccaacacagtgggacaatggttactttgag
ttattgcttaattacgattgggaacttaaaaagagtcctgcaggtgcttggcaatggcag
cctatcaatattaaagaagaacataagcctgttgatgttgaagacccttcgattcgccta
agtcctattatgacagacgctgatatggcgatgaaaatggaccctgaatatcgaaaaatt
tcagatcgcttttatcaagatccagcttacttctccgaggtatttgcccgagcttggttt
aaattaacccatcgtgatttaggccctaaaagtcgctatcttggaactgatgttcccgct
gaagagttaatttggcaggaccctattccacaagttgattacagcttaactgaacaagaa
gttaccgatattaaggctaaaatcttggccagtggattaagtattgctcaacttgttgct
accgcttgggacagcgcccgcactttccgtggctcagattttcgtggcggagcaaacggt
gctcgtattcgcttagcgccacagaaagactggcaaggcaatgagccggcaagattacaa
aaagtattagccgtgttagcgactattcaagcaggcttaactaaatctgtcagtattgca
gacttaattgtactcggcggcactgctgcagtagaaaaagcagctcatgcggctggtgtt
cacgttaaggtgccttttgccgctggtcgcggtgactcaaccctagcacaaacagatgtt
gaatcttttgacgtattagagcctctacacgatgcatttagaaactggcaaaagaaagac
tatgttgttcagccagaagaaatgatgctcgaccgtacccaattaatgggactaaccgcg
catgaaatgacggtattggtgggtggtatgcgagtattaggtgccaactacgacaacagc
aaacatggcgtatttaccgacaatgttggtgtgttatcaaatgacttttttgtcaactta
actgatatgtcgtataactggaaacctgcaggtaaaaacctttatcacatcgtggatcgc
agcaccgataaagtgaaatggactgcaacccgagtcgatttagtctttggttcaaactct
attttacgttcgtatgcagagatttatgcgcaagacgacgcaaaagagaagtttgttaac
gatttcgttaaaacatggactaaagtaatgaatgcagataggtttgatcttatgtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SFR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (1)   
   PROSITE (2)   
All databases (17)

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