KEGG T00395: Sfri

Shewanella frigidimarina: Sfri_2343

Entry

Sfri_2343 CDS T00395

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sfr Shewanella frigidimarina

Pathway

sfr00020	Citrate cycle (TCA cycle)
sfr00310	Lysine degradation
sfr00380	Tryptophan metabolism
sfr01100	Metabolic pathways
sfr01110	Biosynthesis of secondary metabolites
sfr01120	Microbial metabolism in diverse environments

Module

sfr_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sfr00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sfr00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sfr00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2790067..2792889)

AA seq 940 aa
MHQGIMKAWLESSHLSGSNSTYVEEMYEAYQEDPQSVTPDWQLVFDNLPPVNGASVEVPE
TAHSKVRDYFRSLALQGRLKNATSVGDPELDAKQVKVLQLINAHRFRGHQNANLDPLGLW
KREAVQELDPAYHGLTVDDMQRQFNTGSFALGGETMKLADIIHALKSTYCGSIGAEYMHI
TDTDEKRWIQQRLEPTLGKAKYDNSVKKRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNLLINVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRRGCKDGLQVMPIT
IHGDSAITGQGIVQETFNMSQTRGFTIGGSIRIVVNNQVGFTTSNQADTRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENSIPADEVTGLINHYRDALDAGDCVVKEWRPMTLHTVDW
TPYLNREWDEEYAGSMSMERLQNLANKLVDIPENHTLQSRVAKICADRTAMAKGEKLLDW
GFAETLAYASILEDKKRVRITGQDSGRGTFFHRHAVLHSQKDGSTYLPLRNVADEQGPID
IIDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFVNCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSGRLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSTLEELAEGTFQNIIGEIDTLDASQVDRVVFCSGKVYFELLEKRR
KENVTNVAIVRVEQLYPFPDVEMRAALETYQHVTDFVWCQEEPQNQGAWYCSQHHFWANI
PAGAQLTYAGREASAAPACGYPGLHVQQQESLVNSALKLS

NT seq 2823 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgagtcgtcacatttaagtggttcgaactcg
acctacgtagaagagatgtatgaagcctatcaagaagatccgcaatcagttactcctgat
tggcagcttgtttttgataacctccctccggttaacggtgcctcagtagaagtacccgaa
actgctcactctaaagttcgtgactatttccgtagtttagctttacaaggtcgtttaaaa
aacgctactagcgtcggcgacccagagttagatgcgaagcaagttaaagtcctgcaactg
atcaatgctcaccgtttccgtggccatcaaaatgccaatttagatccattaggattgtgg
aagcgtgaagctgttcaggaattggatcctgcttaccacggcttaaccgttgatgacatg
caacgtcagtttaatactggttcattcgccctcggcggtgagaccatgaagcttgctgat
attattcatgcactaaagagtacctattgtggctcgataggtgctgaatacatgcatatt
actgataccgatgaaaagcgttggatccaacaacgtcttgaaccgacattaggtaaagcc
aagtacgataacagcgtcaaaaagcgtattcttgaagggttgaatgcagccgaaggtatc
gaaaaatatcttggtgctaaattccctggagctaaacgattctctttagaaggtggtgat
gcgctcgttccgatgatgcgtgaaatcatttaccgtgcaggcgaagctggaactaaagaa
atcgtagtaggtatggctcaccgtggtcgtttaaacttgctcataaacgtgctgggtaaa
cgtcctgctgaattgtttgatgagtttgcgggtaagcatgcggacactcacggttctggc
gacgtaaaatatcaccaaggtttctcatctgattttgaaacgccaggtggaaacgttcat
ttagcattagcctttaacccatctcatttagagatcgttaatccagtggttattggttct
gtacgtgctcgtcaagatcgtcgtggttgtaaagacggtctgcaagttatgcctatcacc
attcatggtgattcagctataactggccaaggcattgtgcaagagacgttcaacatgtct
caaacacgtggttttactattggtggtagtattcgaattgtggttaataaccaagttggt
tttaccacatcaaaccaagctgacacacgttcaaccgaatactgtactgacatcgctaag
atggttcaggcacctattttccatgtcaattctgacgatcctgaagccgttgcgtttatt
tctcaacttgcagtggattatcgtaatgaatttaaacgtgatgtagtgattgatttagtg
tgttatcgccgtcatggccataacgaagctgatgagcctagtgcgactcagccgttaatg
tacgctaaaatcaaaaaacaccctacgccacgtaaaatttatgctgataagttgatagct
gaaaacagcattcctgccgatgaagtgaccggactgattaaccattatcgtgatgcatta
gatgcaggtgattgtgtggttaaagaatggcgtcctatgacgttacatacagttgactgg
acaccttatttaaatcgcgaatgggatgaagaatacgccggttcaatgtcgatggaacgt
ctgcaaaacttagccaataagttagttgatattcctgaaaatcatacgcttcaatctcgt
gttgccaaaatttgtgctgatcgcactgccatggctaaaggcgagaagttattagactgg
ggtttcgctgaaacgttagcttatgcttctattcttgaagataaaaagcgtgtgcgcatt
acgggtcaagactctggtcgcggcacgttcttccatcgtcatgctgtattgcatagccaa
aaagacggttctacctatttacctttgcgtaatgtggctgatgaacaagggccaattgat
attattgactcagtattatcagaagcatcagtgttggcatttgaatacggttacgcgact
gcagaacctggtggcttgaccatttgggaagcgcagtttggtgacttcgttaactgtgca
caggtagtgattgaccaattcttatcatctggtgagcaaaagtggggccgtttatgtggt
ctgactatgttgttacctcatggttatgaaggtcaaggacctgagcattcaagtggccgt
ttagagcgtttcttgcaattatgtgctaaccacaacatgcaagtgtgtgtgccatcaact
ccggcgcaggtttatcatatgttgcgtcgccaagttgtgcgtcctatgcgtcgcccgtta
gtggtaatgtcacctaaatctttgctacgtcacccattagcggtgtctaccttagaagaa
cttgctgaaggtactttccaaaatatcattggtgagatagataccttagatgcaagtcaa
gttgaccgtgttgtattctgtagcggtaaggtgtatttcgagttacttgaaaagcgtcgt
aaagagaatgtgaccaacgttgccatcgtgcgtgttgagcagctgtatccgttccctgat
gtggaaatgcgtgcagcgttagaaacatatcaacatgttactgattttgtttggtgtcaa
gaagagccgcaaaaccaaggggcatggtactgtagtcagcatcatttctgggctaatatt
cctgcaggtgctcaattaacttatgccggtcgtgaagcttctgctgcaccagcatgtggt
taccctgggttgcatgtacagcagcaagaatcattagtaaatagcgcattaaaactgtcg
taa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SFR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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