KEGG T00395: Sfri

Shewanella frigidimarina: Sfri_3173

Entry

Sfri_3173 CDS T00395

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

sfr Shewanella frigidimarina

Pathway

sfr00020	Citrate cycle (TCA cycle)
sfr00620	Pyruvate metabolism
sfr00630	Glyoxylate and dicarboxylate metabolism
sfr00680	Methane metabolism
sfr01100	Metabolic pathways
sfr01110	Biosynthesis of secondary metabolites
sfr01120	Microbial metabolism in diverse environments

Module

sfr_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfr_M00012	Glyoxylate cycle
sfr_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sfr00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:sfr00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:sfr00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:sfr00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C Semialdhyde_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3800557..3801492)

AA seq 311 aa
MKVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAG
QDPTDALVGADVVLMSAGVARKPGMDRSDLFNINAGIVRNLMEKVAVTCPKALVGIITNP
VNTTVAIAAEVLKNAGVYDKNRLFGITTLDVIRSETFIAELKGLNVADVKVNVIGGHSGV
TILPLLSQVEGVTFTDEEVAAMTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLQGEANVVECAYVDGGSEHATFFAQPILLGKNGVEKVLPYGEISAFEANARDAMLDTLK
GDIKLGVEFVK

NT seq 936 nt +upstreamnt +downstreamnt
atgaaagttgctgtattgggtgccgctggtggtattggccaggctctagctttactgtta
aaaactcaactgcctgcgggctcaaagttgtctctatatgacatcgctcctgttactcct
ggtgtagcggttgacttaagtcacatcccaacagatgtagaagtaaaaggttttgctggt
caagatcctactgatgcattagttggcgcagacgtagtgttaatgtctgctggtgttgcg
cgtaagcctggtatggatcgttcagatctattcaacatcaacgctggtatcgtgcgtaac
ctaatggaaaaagtggctgtaacttgccctaaagcactagtgggtattattactaaccca
gttaacacgactgtagcgattgctgctgaagtattaaaaaatgccggtgtttatgacaaa
aaccgtttattcggtatcacaacacttgacgttatccgtagcgaaaccttcatcgctgag
cttaaaggcttaaacgttgctgacgttaaagttaacgtcatcggcggacacagcggtgtg
actattcttccactactttctcaagttgaaggtgttactttcactgatgaagaagttgca
gcaatgacaactcgcattcaaaacgcgggtactgaagttgttgaagctaaagccggtggc
ggtagcgcaacattatcaatgggccaagctgcatgtcgctttggtttatcattggtacgt
ggtctacaaggcgaagctaacgttgttgagtgtgcctatgttgacggcggcagtgagcac
gctacattcttcgcacagccaattctacttggcaaaaacggcgtagaaaaagtattacct
tacggtgaaatcagcgcattcgaagctaacgctcgcgatgcaatgttagacacccttaaa
ggtgacatcaaattaggcgttgaatttgttaagtaa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SFR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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