KEGG T03315: SFyv

Shigella flexneri Shi06HN006 (serotype Yv): SFyv_1366

Entry

SFyv_1366         CDS       T03315

Name

(GenBank) ribosomal RNA large subunit methyltransferase I

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

sfs Shigella flexneri Shi06HN006 (serotype Yv)

Brite

KEGG Orthology (KO) [BR:sfs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfs03009]
    SFyv_1366
Enzymes [BR:sfs01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     SFyv_1366
Ribosome biogenesis [BR:sfs03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SFyv_1366

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 MTS Methyltransf_25 Met_10 Methyltransf_15 Methyltransf_11 PrmA TRM Methyltransf_12 Spermine_synth PUA Methyltransf_10 Methyltr_RsmB-F

Other DBs

NCBI-ProteinID:

AIL39891

Position

complement(1013480..1014655)

AA seq 391 aa
MLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARV
WTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLV
LQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPPALLPI
EEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQ
VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFV
ENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ
FIEQFRQAADHPVIATYPEGLYLKGFACRVM

NT seq 1176 nt +upstreamnt +downstreamnt
gtgttagccaaagggcgcgaaaaatcattacttcgtcgccatccgtgggtcttttccggg
gccgttgcccgcatggaaggtaaagccagcctcggtgaaaccatcgatattgttgatcat
cagggaaaatggttagcacgcggcgcttattcgccagcttcgcaaatccgggcgcgcgtc
tggacgtttgacccgtctgagtctatcgacattgcttttttttcccgccgtttgcaacaa
gcacaaaaatggcgtgactggctggcgcaaaaagatggcctcgacagctatcgtttaatc
gccggagaatctgatggcctgccgggtattactatcgatcgtttcggtaattttctggtg
ctgcaactgctgagtgctggcgcagaatatcagcgcgcggcattaattagtgccctgcaa
acgctgtacccggaatgtgcgatttacgatcgcagcgatgttgcggtacgtaaaaaagaa
gggatggagctgacccagggcctcgtcaccggcgagttgccgcctgccctgctgccgatt
gaagaacacggcatgaagctgctggtggatattcagcacggacacaaaacgggctactat
ctggaccagcgagacagccgcctggctacccgccgctacgttgaaaataaacgtgtgctg
aactgtttctcctataccggtggtttcgccgtatcggcactgatgggcggttgcagccag
gttgtcagcgttgatacctcccaggaagcgctggatattgcacggcagaacgttgagctg
aacaaactggatctgagcaaggctgagtttgtccgtgatgatgtctttaaattgctgcgt
acttatcgcgatcgcggtgaaaaatttgacgttatcgtgatggacccgccgaagtttgtt
gagaataaaagccagttgatgggcgcgtgtcgtggttataaagacatcaacatgctggcg
attcagttgctgaatgaaggcggtattctcctgactttctcctgttccggtctgatgacc
agcgatttatttcagaaaatcatcgcggatgccgcaattgatgccggtcgtgatgtacaa
tttatagagcagttccgtcaggcagccgatcatccggtgatcgctacctacccggaaggg
ctatatctgaaagggtttgcctgtcgcgtcatgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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