KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_03954
Entry
NCTC1_03954       CDS       T03751                                 
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase, ADP-L-glycero-D-manno-heptose-6-epimerase, ADP-L-glycero-D-mannoheptose-6-epimerase,Lipid A core-O-antigen ligase and related enzymes,ADP-glyceromanno-heptose 6-epimerase,NAD dependent epimerase/dehydratase family
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00540  Lipopolysaccharide biosynthesis
sft01100  Metabolic pathways
sft01250  Biosynthesis of nucleotide sugars
Module
sft_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:sft00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    NCTC1_03954 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sft01005]
    NCTC1_03954 (rfaD)
Enzymes [BR:sft01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     NCTC1_03954 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:sft01005]
 Core region
  NCTC1_03954 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 KR adh_short
Other DBs
NCBI-ProteinID: CDX09058
UniProt: A0A6D2Y1W9
Position
1:3678853..3679785
AA seq 310 aa
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggtgatgtcgaagcgattttccacgaaggcgcatgctcttcc
accaccgagtgggatggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaatcccgttcctgtatgcctcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaatgtctac
ggttactcaaaattcctgtttgatgaatatgttcgtcaaatcctgccagaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaataacggtgaatcaccgaagctg
ttcgaaggtagcgagaacttcaaacgtgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggtatcttcaacctcggcaccggtcgtgca
gaatccttccaggcagtagcagatgctacgctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatacatggcctggctgaatcgcgacgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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