KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_04236
Entry
NCTC1_04236       CDS       T03751                                 
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase,3-octaprenyl-4-hydroxybenzoate decarboxylase,3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases,UbiD family decarboxylase,3-octaprenyl-4-hydroxybenzoate carboxy-lyase
  KO
K03182  4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft00130  Ubiquinone and other terpenoid-quinone biosynthesis
sft01100  Metabolic pathways
sft01110  Biosynthesis of secondary metabolites
sft01240  Biosynthesis of cofactors
Module
sft_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:sft00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    NCTC1_04236 (ubiD)
Enzymes [BR:sft01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.98  4-hydroxy-3-polyprenylbenzoate decarboxylase
     NCTC1_04236 (ubiD)
SSDB
Motif
Pfam: UbiD UbiD_C UbiD_N
Other DBs
NCBI-ProteinID: CDX09324
Position
1:3953747..3955240
AA seq 497 aa
MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSM
PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM
PTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYR
QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIDPGEMAPEGPYGDHTGYYNEVDN
FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAH
IDAIWDELAIFNNGKSA
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggacgccatgaaatataacgatttacgcgacttcctgacgctgcttgaacagcagggt
gagctaaaacgtatcacgctcccggtggatccgcatctggaaatcactgaaattgctgac
cgcactctgcgtgctggtgggcctgcgctgttgttcgaaaaccctaaaggctactcaatg
ccggtgctgtgcaacctgttcggtacgccaaagcgcgtggcgatgggcatggggcaggaa
gatgtttcggcgctgcgtgaagttggtaaattattggcgtttctgaaagagccggagccg
ccaaaaggtttccgcgacctgtttgataaactgccgcagtttaagcaggtgttaaacatg
ccgacaaagcgactgcgtggtgcgccctgccaacaaaaaatcgtctctggcgatgacgtc
gatctcaatcgcattcccattatgacctgctggccggaagatgccgcgccgctgattacc
tgggggctgaccgtaacgcgcggcccgcataaagagcggcagaatctgggcatttatcgc
cagcagctgattggtaaaaacaaactgattatgcgctggctgtcgcatcgcggcggcgcg
ctggattatcaggagtggtgtgcggcgcatccgggcgaacgtttcccggtttctgtggcg
ctgggtgccgatcctgccacgattctcggtgcagtcacccccgttccggatacgctttca
gagtatgcgtttgccggattgctacgcggcaccaaaaccgaagtagtaaagtgtatttcc
aatgacctcgaagtgccagccagtgccgaaatcgtcctggaagggtatatcgatcctggt
gagatggcgccggaagggccgtatggtgaccacacaggttactataatgaagtcgataat
ttcccggtgtttaccgtgacgcatattacccagcgtgaagatgcgatttaccattccacc
tataccgggcgtccgccagatgagcccgcggtactgggcgtggcgttgaacgaagtgttt
gtaccgattctgcaaaaacagttcccggaaattgtcgatttttacctgccgccggaaggc
tgttcttatcgtctggcggtagtgacgatcaaaaaacagtacgccggacacgcgaagcgc
gtcatgatgggcgtctggtcgttcttacgccagtttatgtacactaaatttgtgatcgtt
tgcgatgatgacgtcaacgcacgcgactggaacgatgtgatttgggcgattaccacccgt
atggacccggcgcgggatactgttctggtagaaaatacgcctattgattatctggatttt
gcctcgcctgtctctgggctgggttcaaaaatggggctggatgccacgaataaatggccg
ggggaaacccagcgtgaatggggacgtcccatcaaaaaagatccagatgttgtcgcgcat
attgacgccatctgggatgaactggctatttttaacaacggtaaaagcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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