KEGG   Syntrophobacter fumaroxidans: Sfum_0121
Entry
Sfum_0121         CDS       T00418                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sfu  Syntrophobacter fumaroxidans
Pathway
sfu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sfum_0121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfu03019]
    Sfum_0121
   03110 Chaperones and folding catalysts [BR:sfu03110]
    Sfum_0121
   03029 Mitochondrial biogenesis [BR:sfu03029]
    Sfum_0121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfu04147]
    Sfum_0121
Enzymes [BR:sfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Sfum_0121
Messenger RNA biogenesis [BR:sfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Sfum_0121
Chaperones and folding catalysts [BR:sfu03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Sfum_0121
Mitochondrial biogenesis [BR:sfu03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Sfum_0121
Exosome [BR:sfu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Sfum_0121
  Exosomal proteins of other body fluids (saliva and urine)
   Sfum_0121
  Exosomal proteins of breast cancer cells
   Sfum_0121
  Exosomal proteins of colorectal cancer cells
   Sfum_0121
  Exosomal proteins of bladder cancer cells
   Sfum_0121
SSDB
Motif
Pfam: Cpn60_TCP1 divDNAB
Other DBs
NCBI-ProteinID: ABK15824
UniProt: A0LEH2
Position
146644..148275
AA seq 543 aa
MAKQLIYDVKAREALLSGVNILADAVKVTLGPKGRNVVIEKAFGGPTVTKDGVTVAKEIE
LEDKFENMGAQMVKEVASKTSDVAGDGTTTATILAQSIYYEGSKLVAAGANPMALKRGIE
KAVQVVVDELKKISKPTKDQKEIAQVGTISANNDPTIGNIIAEAMNKVGKEGVITVEEAK
AMETTLEVVEGMQFDRGYISPYFVTDPEKMEVLLNEPLILINEKKISNMKDLLPVLEQIA
KMGRPLLIIAEDVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLDDIAILTGGQVI
SEEKGIKLESVGLNDLGKAKTIRIDKDNTTIVDGAGDRKALEGRVRQIRTQIDETTSDYD
REKLQERLAKMVGGVAVISVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYLR
CLGALGAVNLEGDEKLGLNIVKRALEEPARQIAMNAGEEGSVIVQRVKSETGAFGFDAET
SQFCDLIEAGVIDPTKVTRTALLNAASVSALMLTTECMVSEIPKEDKGAPAGMGGMPPGG
GMY
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcgaaacagctgatctacgatgtcaaagctcgcgaagctttgctgagcggagtgaat
attctggcggacgcagtgaaggtaacgcttggtcccaaaggccgcaacgtggtgattgaa
aaggcattcggcgggcctaccgtgaccaaggacggcgtgaccgttgccaaggaaatcgag
ctcgaggacaagttcgagaacatgggtgcccagatggtgaaggaagtcgccagcaagacc
agcgacgttgccggtgacgggaccaccacggcgaccatactcgctcagtccatctattac
gaaggttccaagctggttgccgccggtgccaatcccatggcgctcaagcgcggcatcgaa
aaggctgtgcaggtggtggtggacgaactgaagaagatcagcaagcccaccaaggaccag
aaggaaatcgcccaggtcggcaccatttcggcgaacaacgatcccaccatcggcaacatc
atcgccgaagccatgaacaaggtgggcaaggaaggtgtgatcacggtcgaggaagccaag
gccatggagacaaccctggaagttgtcgagggcatgcagttcgatcgcggctatatttcc
ccgtatttcgtgaccgaccccgaaaagatggaagtccttctgaacgaacccctgattctc
atcaacgagaagaagatcagcaacatgaaggacctgctgccggtcctggagcagatcgcc
aagatgggcagaccgttgctgatcattgccgaagacgtcgaaggcgaagcgctggccacc
ctggtggtgaacaagctgcgcggaacgctgcatgtgtgcgccgtgaaggcaccgggattc
ggcgatcgccgcaaggccatgctcgacgacatcgccattctgaccggcggccaggtgatc
agtgaagagaagggcatcaagctcgagtccgtcgggctgaacgatctcgggaaagcaaag
accatccggatcgacaaggacaacaccaccatcgtcgacggcgcgggcgatcgcaaggcg
ctcgaagggcgggtgcgccagattcggacccagatcgacgagaccaccagcgattacgac
cgtgagaagctgcaggagcggctggcaaaaatggtcggcggagtggcggtcatcagtgtc
ggcgcggccaccgaaaccgaaatgaaagagaagaaggcgcgcgtcgaggacgctttgaac
gctacccgggccgcagtggaggaaggcatcgttcccggcggcggagtggcctatctgcgc
tgcctcggggcactgggagcggtgaacctggaaggcgacgaaaaactggggctcaacatc
gtcaaacgcgcacttgaagagcccgcccgccagattgccatgaatgccggtgaggaaggc
tccgtaatcgtgcagagggtcaagtccgaaacgggcgctttcggtttcgacgcggaaacc
agccagttctgcgacctcatcgaagcgggtgtcatcgatccgaccaaagtgacccgtacc
gctctgctcaacgcggccagcgtttcggcattgatgctgaccaccgagtgcatggtttcg
gaaatcccgaaagaggacaagggagcccctgcagggatgggcggaatgccccccggaggc
ggaatgtactaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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