KEGG S.flexneri_8401: SFV

Shigella flexneri 8401 (serotype 5b): SFV_0054

Entry

SFV_0054 CDS S.flexneri_8401

Gene name araA

Definition L-arabinose isomerase (EC:5.3.1.4)

Orthology K01804 L-arabinose isomerase [EC:5.3.1.4]

Pathway sfv00040 Pentose and glucuronate interconversions
sfv01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose and glucuronate
interconversions [PATH:sfv00040]

SSDB

Motif Pfam: Arabinose_Isome Arabinose_Iso_C

Other DBs NCBI-GI: 110804126
NCBI-GeneID: 4209885
UniProt: Q0T8D5

Position complement(64345..65847)

AA seq 500 aa
MAIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEI
TAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDF
MNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCR
FGDNMREVAVTDGDKVAAQIKFGFSVNTRAVGDLVQVVNSISDGDVNALVDEYESCYTMT
PATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLPVQRLMQQG
YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAV
EEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLP
KLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDT
RLPAFKDALRWNEVYYGFRR

NT seq 1503 nt +upstreamnt +downstreamnt
atggcgatttttgataattatgaagtgtggtttgtcattggcagccagcatctgtatggc
ccggaaaccctgcgtcaggtcacccaacatgccgagcacgttgttaatgcgctgaatacg
gaagcgaaactgccctgcaaactggtgttgaaaccgctgggcaccacgccggatgaaatc
accgctatttgccgcgacgcgaattacgacgatcgttgcgctggtctggtggtgtggctg
cacaccttctccccggccaaaatgtggatcaacggcctgaccatgctcaacaaaccgttg
ctgcaattccacacccagttcaacgcggcgctgccgtgggacagtatcgatatggacttt
atgaacctgaaccagactgcacatggcggtcgcgagttcggcttcattggcgcgcgtatg
cgtcagcaacatgccgtcgttaccggtcactggcaggataaacaagcccatgagcgtatc
ggctcctggatgcgtcaggcggtctctaaacaggatacccgtcatctgaaagtctgccga
tttggcgataacatgcgtgaagtggcggtcaccgatggcgataaagttgccgcacagatc
aagttcggtttctccgtcaataccagggcggttggcgatctggtgcaggtggtgaactcc
atcagcgacggcgatgttaacgcgctggtcgatgagtacgaaagctgctacaccatgacg
cctgccacacaaatccacggcgaaaaacgacagaacgtgctggaagcggcgcgtattgag
ctggggatgaagcgtttcctggaacaaggtggcttccacgcgttcaccaccacctttgaa
gatttgcacggtctgaaacagcttccaggtctgcccgtacagcgtctgatgcagcagggt
tacggctttgcgggcgaaggcgactggaaaaccgccgccctgcttcgcatcatgaaggtg
atgtcaaccggtctgcagggcggcacctcctttatggaggactacacctatcacttcgag
aaaggtaatgacctggtgctcggctcccatatgctggaagtctgcccgtcgattgccgta
gaagagaaaccgatcctcgacgttcagcatctcggtattggtggtaaggacgatcctgcc
cgactgatcttcaatacccaaaccggtccagcgattgtcgccagcctgattgatctcggc
gatcgttaccgtctgctggttaactgtatcgacacggtgaaaacaccgcactccctgccg
aaactgccggtggcgaatgcactgtggaaagcgcaaccggatctgccaactgcttccgaa
gcgtggatcctcgctggtggcgcgcaccataccgtcttcagccatgcgctgaacctcaac
gatatgcgccagttcgccgagatgcacgacattgaaatcacggtgattgataacgacacc
cgcctgccagcgtttaaagacgcactgcgctggaacgaagtgtattacggatttcgtcgc
taa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)

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