KEGG S.flexneri_8401: SFV

Shigella flexneri 8401 (serotype 5b): SFV_0055

Entry

SFV_0055 CDS S.flexneri_8401

Gene name araB

Definition ribulokinase (EC:2.7.1.16)

Orthology K00853 L-ribulokinase [EC:2.7.1.16]

Pathway sfv00040 Pentose and glucuronate interconversions
sfv01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose and glucuronate
interconversions [PATH:sfv00040]

SSDB

Motif Pfam: FGGY_C FGGY_N XPC-binding

Other DBs NCBI-GI: 110804127
NCBI-GeneID: 4209886
UniProt: Q0T8D4

Position complement(65858..67558)

AA seq 566 aa
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES
MEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK
DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL
CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT
DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI
LIADKQSVGERAVKGICGQVDDSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQH
PELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA
TDTPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL
QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQHFEQLYRRYQ
QWAMSAEQHYLPTSAPAQAAQAVATL

NT seq 1701 nt +upstreamnt +downstreamnt
atggcgattgcaattggcctcgattttggcagtgattctgtgcgagctttggcggtggac
tgcgccagcggtgaagagatcgccaccagcgtagagtggtatccccgttggcaaaaaggg
caattttgtgatgccccgaataaccagttccgtcatcatccgcgtgactacattgagtca
atggaagcggcactgaaaaccgtgcttgcagagcttagcgtcgaacagcgcgcagctgtg
gtcgggattggcgttgacagtaccggctcgacgcccgcaccgattgatgccgacggtaac
gtgctggcgctgcgcccggagtttgccgaaaacccgaacgcgatgttcgtattgtggaaa
gaccacactgcggttgaagaagcggaagagattacccgtttgtgtcacgcgccgggcaac
gttgactactcccgctatattggcggtatttattccagcgaatggttctgggcaaaaatc
ctgcatgtgactcgccaggacagcgccgtggcgcaatctgccgcatcgtggattgagctg
tgcgactgggtgccagctctgctttccggtaccacccgcccgcaggatattcgtcgcgga
cgttgcagcgccgggcataaatctctgtggcacgaaagctggggcggcttgccgccagcc
agtttctttgatgagctggacccgatcctcaatcgccatttgccttccccgctgttcact
gacacctggactgccgatattccggtgggcaccttatgcccggaatgggcgcagcgtctc
ggcctgcctgaaagcgtggtgatttccggcggcgcgtttgactgccatatgggcgcagtt
ggcgcaggcgcacagcctaacgcactggtaaaagttatcggtacttccacctgcgacatt
ctgattgccgacaaacagagcgttggcgagcgggcagttaaaggtatttgcggtcaggtt
gatgacagcgtggtgcctggatttatcggtctggaagcaggccaatcggcgtttggtgat
atctacgcctggtttggtcgcgtactcggctggccgctggaacagcttgccgcccagcat
ccggaactgaaagcgcaaatcaacgccagccagaaacaactgcttccggcgctgaccgaa
gcatgggccaaaaatccgtctctggatcacctgccggtggtgctcgactggtttaacggt
cgtcgcacgccaaacgctaaccaacgcctgaaaggggtgattaccgatcttaacctcgct
accgacactccgctgctgttcggcggtttgattgctgccaccgcctttggcgcacgcgca
atcatggagtgctttaccgatcaggggatcgccgtcaataacgtgatggcgctgggcggc
atcgcgcggaaaaaccaggtcattatgcaggcctgctgcgacgtgctgaatcgcccgctg
caaattgttgcctctgaccagtgctgtgcgctcggtgcggcgatttttgctgccgtcgcc
gcgaaagtgcacgcagacatcccatcagcccagcaaaaaatggccagtgcggtagagaaa
accctgcaaccgcgcagcgaacaggcacaacactttgaacagctttatcgccgctatcag
caatgggcgatgagcgccgaacaacactatcttccaacttccgccccggcacaggctgcc
caggccgttgcgactctataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)

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