KEGG   Shigella flexneri 8401 (serotype 5b): SFV_0107
Entry
SFV_0107          CDS       T00377                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00010  Glycolysis / Gluconeogenesis
sfv00020  Citrate cycle (TCA cycle)
sfv00260  Glycine, serine and threonine metabolism
sfv00280  Valine, leucine and isoleucine degradation
sfv00310  Lysine degradation
sfv00380  Tryptophan metabolism
sfv00620  Pyruvate metabolism
sfv00630  Glyoxylate and dicarboxylate metabolism
sfv00640  Propanoate metabolism
sfv00785  Lipoic acid metabolism
sfv01100  Metabolic pathways
sfv01110  Biosynthesis of secondary metabolites
sfv01120  Microbial metabolism in diverse environments
sfv01200  Carbon metabolism
sfv01210  2-Oxocarboxylic acid metabolism
sfv01240  Biosynthesis of cofactors
Module
sfv_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sfv_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SFV_0107 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SFV_0107 (lpdA)
   00620 Pyruvate metabolism
    SFV_0107 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SFV_0107 (lpdA)
   00640 Propanoate metabolism
    SFV_0107 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SFV_0107 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SFV_0107 (lpdA)
   00310 Lysine degradation
    SFV_0107 (lpdA)
   00380 Tryptophan metabolism
    SFV_0107 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SFV_0107 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfv04147]
    SFV_0107 (lpdA)
Enzymes [BR:sfv01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SFV_0107 (lpdA)
Exosome [BR:sfv04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SFV_0107 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 FAD_binding_3 DAO Lycopene_cycl FMO-like
Other DBs
NCBI-ProteinID: ABF02392
UniProt: Q0T884
Position
125831..127258
AA seq 475 aa
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKF
TGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLL
VMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgatgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttac
tccgctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaac
acccttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgta
gcaaaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccg
aaaaccgatattgacaagattcgtacctggaaagagaaagtgatcaatcagctgaccggt
ggtctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaattt
accggggctaacaccctggaagttgaaggtgagaacggcaaaaccgtgatcaacttcgac
aatgcgatcattgcagcgggttctcgcccgatccaactgccgtttattccgcatgaagat
ccgcgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctg
gtaatgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttca
cagattgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgtt
aaagtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttacc
gccgttgaagcgaaagaagacggtatttatgtgacgatggaaggcaaaaaagcaccagct
gaaccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaac
ctcgacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaa
cagctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatg
ctggcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaa
cactacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgg
gtaggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttc
ccgtgggctgcttctggtcgtgctatcgcttctgactgcgcagacggtatgaccaagctg
attttcgacaaagaatctcaccgtgtgatcggtggtgcgattgttggtaccaacggcggc
gagctgctgggtgaaatcggcctggcaatcgaaatgggttgtgatgctgaagacatcgca
ctgaccatccacgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttc
gaaggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa

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