KEGG   Shigella flexneri 8401 (serotype 5b): SFV_0379
Entry
SFV_0379          CDS       T00377                                 
Symbol
ribD
Name
(GenBank) 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00740  Riboflavin metabolism
sfv01100  Metabolic pathways
sfv01110  Biosynthesis of secondary metabolites
sfv01240  Biosynthesis of cofactors
sfv02024  Quorum sensing
Module
sfv_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SFV_0379 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SFV_0379 (ribD)
Enzymes [BR:sfv01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SFV_0379 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SFV_0379 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ABF02651
UniProt: Q0T7H5
Position
397069..398154
AA seq 361 aa
MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA
TAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDVSHGL
MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQRAQ
SHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTPEHRIVQ
QPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEAGPTLAG
VLLQAGLVDELIVYIAPKLLGSDARGLCSLPGLEKLADAPQFKFKEIRHVGPDVCLHLVG
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgcgggcgctaaagctggcgcaacgaggacgttttaccacccaccccaacccgaat
gtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaaggttaccaccaacgagcg
ggtgaaccacatgccgaagtacacgcgttgcgtatggcgggtgaaaaagccaaaggcgca
acggcgtatgtgacactcgaaccctgtagccatcatggccgtacgccaccgtgctgtgac
gcactcatcgccgctggcgtagcgcgcgtggtcgcagcgatgcaagatcctaacccgcag
gtcgctgggcgtggactttaccgtctgcaacaggctggcattgacgtcagccacgggctg
atgatgagtgaagccgagcaattgaataaaggctttctcaagcggatgcgcaccggcttt
ccttatattcagttaaaacttggcgcatcgcttgatggccgcacggcgatggcgagcggc
gaaagccagtggatcacttcgcctcaggcgcggcgcgacgtacaacgacagcgcgcacaa
agtcatgccattttaaccagcagcgccacggtgctggcggatgatccagccttaacagtg
cgttggtctgaactggatgaacaaactcaggcgctctacccgcaacaaaatctccgccag
ccagtacgtattgtgattgatagccaaaatcgcgtgacgccggaacatcgcattgtgcag
cagcccggcgaaacctggttcgcgcgtacgcaggaagattctcgtgagtggccggaaacg
gtgcgtaccttgctgattccagagcataaaggtcatctggatctggttgtactgatgatg
caactgggtaaacagcagattaacagcatctgggtggaagcggggccaacgctcgctggc
gtattgctacaggcgggtttagtcgatgagctgattgtctatatcgcacctaaactatta
ggcagcgacgcccgtggattatgctcgctgccagggcttgagaaattagccgacgccccc
caatttaaattcaaagagatacgtcatgtaggcccggatgtttgcctgcatttagtgggt
gcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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