KEGG   Shigella flexneri 2457T (serotype 2a): S0115
Entry
S0115             CDS       T00128                                 
Symbol
lpdA
Name
(GenBank) lipoamide dehydrogenase (NADH)
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sfx  Shigella flexneri 2457T (serotype 2a)
Pathway
sfx00010  Glycolysis / Gluconeogenesis
sfx00020  Citrate cycle (TCA cycle)
sfx00260  Glycine, serine and threonine metabolism
sfx00280  Valine, leucine and isoleucine degradation
sfx00310  Lysine degradation
sfx00380  Tryptophan metabolism
sfx00620  Pyruvate metabolism
sfx00630  Glyoxylate and dicarboxylate metabolism
sfx00640  Propanoate metabolism
sfx00785  Lipoic acid metabolism
sfx01100  Metabolic pathways
sfx01110  Biosynthesis of secondary metabolites
sfx01120  Microbial metabolism in diverse environments
sfx01200  Carbon metabolism
sfx01210  2-Oxocarboxylic acid metabolism
sfx01240  Biosynthesis of cofactors
Module
sfx_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sfx_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sfx00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    S0115 (lpdA)
   00020 Citrate cycle (TCA cycle)
    S0115 (lpdA)
   00620 Pyruvate metabolism
    S0115 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    S0115 (lpdA)
   00640 Propanoate metabolism
    S0115 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    S0115 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    S0115 (lpdA)
   00310 Lysine degradation
    S0115 (lpdA)
   00380 Tryptophan metabolism
    S0115 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    S0115 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfx04147]
    S0115 (lpdA)
Enzymes [BR:sfx01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     S0115 (lpdA)
Exosome [BR:sfx04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   S0115 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 FAD_binding_3 DAO Lycopene_cycl FMO-like
Other DBs
NCBI-ProteinID: AAP15658
UniProt: P0A9P3
Position
125651..127075
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttactcc
gctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaacacc
cttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgtagca
aaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccgaaa
accgatattgacaagattcgtacctggaaagagaaagtgatcaatcagctgaccggtggt
ctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaattcacc
ggggctaacaccctggaagttgaaggtgagaacggcaaaaccgtgatcaacttcgacaat
gcgatcattgcagcgggttctcgcccgatccaactgccgtttattccgcatgaagatccg
cgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctggta
atgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttcacag
attgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgttaaa
gtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagacggtatttatgtgacgatggaaggcaaaaaagcaccagctgaa
ccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaacctc
gacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaacag
ctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatgctg
gcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaacac
tacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgggta
ggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttcccg
tgggctgcttctggtcgtgctatcgcttctgactgcgcagacggtatgaccaagctgatt
ttcgacaaagaatctcaccgtgtgatcggtggtgcgattgttggtaccaacggcggcgag
ctgctgggtgaaatcggcctggcaatcgaaatgggttgtgatgctgaagacatcgcactg
accatccacgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttcgaa
ggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa

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