KEGG   Shigella flexneri 2457T (serotype 2a): S0596
Entry
S0596             CDS       T00128                                 
Symbol
nei
Name
(GenBank) endonuclease VIII and DNA N-glycosylase with an AP lyase activity
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
sfx  Shigella flexneri 2457T (serotype 2a)
Pathway
sfx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    S0596 (nei)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfx03400]
    S0596 (nei)
Enzymes [BR:sfx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     S0596 (nei)
DNA repair and recombination proteins [BR:sfx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     S0596 (nei)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AAP16099
UniProt: Q83LZ7
Position
complement(606447..607238)
AA seq 263 aa
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFP
NGLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLRPEQLTTH
PFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVG
LTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGELCER
CGGIIEKTTLSSRPFYWCPGCQH
NT seq 792 nt   +upstreamnt  +downstreamnt
atgcctgaaggcccggagatccgccgtgcagcggataacctggaggcggcgatcaaaggc
aaaccactaactgatgtctggtttgccttcccgcagttaaaaacttatcaatcacaactt
atcggtcaacacgttacccatgtggaaacgcgtggtaaggcgttgttaactcattttccc
aacggtttaacgctctacagccataatcagctttacggcgtctggcgcgtggttgatacc
ggcgaagagccgcagaccacgcgagtattgcgggtaaaactgcaaacggctgacaaaacc
attctgctttatagcgcctcggatattgagatgttgaggccggaacaactgaccacgcat
ccgtttttacaacgcgttggtcccgatgtgctggatccgaatctgacgccggaggtggta
aaggaacggttattgtcgccgcgctttcgtaaccgtcagtttgcaggattactgctcgat
caggcgtttctggctgggcttggcaattatttgcgggtggagatcctctggcaggttggg
ttgactggaaatcataaagcgaaagatctcaatgcggcgcaactggatgcactcgcacac
gcgttactggagattcctcggttttcttacgctacgcgggggcaggtggatgagaataag
catcatggggcgctgtttcgctttaaggtttttcatcgtgatggcgaactgtgcgaacgc
tgtggcggcatcattgagaaaaccacgttgtcctcgcgcccgttttactggtgtccaggc
tgccagcactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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