KEGG   Sinocyclocheilus grahami (golden-line barbel): 107557927
Entry
107557927         CDS       T04918                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107557927
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107557927
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107557927
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgh04147]
    107557927
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107557927
Exosome [BR:sgh04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107557927
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107557927
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107557927
NCBI-ProteinID: XP_016096999
Position
Unknown
AA seq 1669 aa
MEGENHLQHWNTLRCFLLCFVVLILTTEVNAGVKKSGGPCGGRDCSGGCQCFPEKGARGL
PGPLGPHGPTGPNGRLGDPGLQGPKGEKGDHGRGGIMGPKGSVGMEGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGESGTPGLPGLNGGPGISGRPGMKGEKGDPLDLWVYMERFR
GDPGPPGFPGVAGPTGNPGYRGTPGLQGPWGPTGFKGVKGHKGESSKKIKGMKGELGEIG
EPGPPGPYSQIRTIPSESQGDKGLKGYKGEPGDLGYLSTRGETGVSGFPGQRGNPGRNGL
PGPRGEIGLPGFPGNSGRKGDRGEPGELIGPFDDTGVGPPGPPGERGPIGNYGPKGVKGL
LGPPGPPPTEQQPVDLWGPEGPRGSKGAEGETGEPGNPATEPGPPGSDGLPGSRGPPGPK
GSLEEFFKGAPGQRGRPGNAGKKGLKGDHGPCDCDVKSPPGLPGLPGDAGDFGMAGEWGQ
EGDQGEPGTRGVDGVPGSPGARGSPGPKGRKGELRFATQKGQSGDSGDPGASGFPGVQGR
PGLHGRDGESGFQGPPGEGPVGEPGDKGYQGQDGPPGLIGQIGQPGQVLGATKGLRGLPG
DEGQVGIDGKQGLPGVPGECVPQGGDQWSIPVECIGDPGPPGERGQPGLPGLDGFPGLQG
VKGSPGLFGEPGAKGEKGLTGRGGPPGPRGFVGPQGDLGYPGTKGVEGAPGFSGKPGLDG
FLGEKGEHGEVFGASLGAAGDPGLPGQRGVIGLPGDPGLQGHQGVEGMPGMIGLKGESGP
SGLQGEIGTPGPPGTFGFPGQPGQLGPPGPPGKTGEPGSSGESGDQGDPGLSGPRGVKGV
TGEPGNFGLQGNIGSPGDPGQQGQFGIYGLSGLKGSKGGQGMTGFPGMPGEHGLKGFSGQ
KGTIGDPGRQGVKGPPGALGLKGERGLMGPPGEKPIMHIPPHMKEVIKGPKGDHGKMGKS
GFTGPRGTKGFPGVPGMEGKDGHPGKPSYTKGTTGFPGVEGFPGQKGMPGYKGKSGIEGF
PGMPGPRGDKGTSGAYGRTGESGIKGIKGEFGPTISLPGSTGLRGETGLPGPFGEKGLIG
NTGDRGSPGFDGIEGMKGYPGEPGRVGRPGSEGLQGFPGTQGQKGWPGVPGQAGTPGIQG
QPGQKGFPGLKGIFGLDGLKGQKGITGVAGSDNLGPSGEPGTKGERGETGIPSTEAGVPG
EVGFKGFIGDPGNKGESGHPGVPGPRGQQGFSDIKGVQGDYGFPGQQGLPGFPGPRGIPG
DPSPFGAKGQKGNPGDFGLTGEKGVQGGAGQKGPSGEPGVSGRKGVNGEPGMMGFPGRRG
FEGDRGPVGPKGDTGPPGFPGLPGAKGLPPVPQKLPGERGPPGPMGIQGPQGRSGNFGPA
GPPGDSGIWGPKGEKGMPGLPGIPGNPGFRGDPGQMGHPGLQGEEGTRGGPGSSGPIGMP
GRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFN
TMPFLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAV
HSQDITIPMCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDQTFQSSPSSETLKAGQLLARISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggagggtgagaaccatctacagcactggaacacattaaggtgttttctgttgtgcttt
gttgtccttatccttacgacagaggtcaacgcaggagtgaagaagagcggtggaccatgt
ggggggagagactgcagtggagggtgtcagtgttttcctgaaaagggtgcgaggggattg
cctggaccccttggtccccatggacccacaggccctaacggtcgactgggagaccctggt
ctccagggtcctaaaggagagaaaggagaccatggcagaggaggcattatgggtccaaaa
ggaagtgtgggaatggagggtgttccagggtttaatggagcagatggagttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaacggaacccgggga
gaatcaggaacaccaggccttccaggactcaatggtggacctggaatatcaggccggcca
ggaatgaagggagagaagggtgaccctttggatctgtgggtctatatggaaagattcagg
ggagatccaggaccaccaggttttccaggagttgctggaccaactggtaacccagggtac
agaggaacgccaggattacaaggtccttggggtcctactggctttaaaggtgttaaagga
cacaagggtgaaagcagtaaaaaaataaaaggaatgaaaggagaattgggcgagattgga
gagccaggcccaccaggaccttactcacaaatccgtacaatcccttcagaatcgcagggt
gacaaaggcttgaaaggttataaaggtgaaccaggagatttggggtatttatctaccaga
ggagagactggtgtgtcagggtttccaggacaacggggtaacccaggacgaaatggtttg
ccaggaccaaggggagagattggacttccaggtttcccaggaaattctggccgcaaagga
gacagaggagaacctggagagctgataggtccttttgatgatactggagtgggtcctcca
ggacctccgggagagcgtggcccaattggaaattatggtcctaagggtgttaaaggactg
ctgggtcccccaggcccccctcccactgaacaacaaccagtggatttgtggggtccagag
ggaccacggggatcaaagggagccgaaggtgaaactggagaacctggtaatcctgccact
gagcctgggccacctggctctgatgggctgcctggatctcgtggaccacctggacccaag
ggatcattggaagaattcttcaaaggcgcaccaggacaacgtggacgtccaggaaatgca
gggaaaaagggactaaagggtgaccatggtccatgcgattgcgatgtaaaatccccacct
ggtcttccgggtcttcctggtgatgctggggactttggcatggcaggcgagtggggtcag
gagggtgatcaaggagagccgggaaccagaggtgtggatggtgtgcctggttcccctggt
gcaagaggatcacctggacccaaaggcagaaaaggagagctgagattcgctactcagaaa
ggacaatctggtgactcaggggacccaggtgctagtggctttccaggagtgcaaggaagg
cctgggcttcatggaagagatggtgaatcaggttttcaaggacctcctggagaaggtcct
gtaggtgagcctggagacaagggataccaaggtcaggatggtcctccaggtctaataggt
caaataggacaacctggtcaagttcttggagcaactaaaggtctaagaggccttcctgga
gacgaaggacaagttggtattgatggaaagcaagggttacctggtgttccaggagagtgt
gtcccacaaggaggagatcagtggagtattccagtggaatgtattggtgatcccgggcca
cctggagagagagggcagcctggacttccagggctagatggatttcctggactgcaaggt
gttaaaggctcaccaggtctttttggagaacctggagccaaaggagagaaaggtttaaca
ggaagaggaggcccacccgggccaagaggttttgttggacctcagggtgacttaggatat
cctggcaccaaaggtgtggaaggagctccaggcttttctggtaaaccaggtttggatggt
tttttaggggaaaagggtgaacatggtgaagtttttggagcttctcttggtgccgctgga
gacccaggactgcctggacagaggggtgtcattggtcttccaggagatccaggacttcaa
ggacaccaaggtgttgagggaatgccgggtatgattggccttaagggtgaaagtggccct
tcaggtcttcaaggagagataggaacacctggacctccaggaacatttggctttcctggg
cagcctggtcaactaggacctcccggaccacctggaaaaaccggagaaccaggttcaagt
ggagaaagtggagatcagggagacccaggcctttctgggcccagaggagtaaagggtgtc
actggagaaccaggaaattttggtctacaaggaaatattgggtcacctggagatccagga
caacaggggcaatttggtatttatggtctttcagggttaaaaggttccaaaggtggtcag
ggcatgacgggtttccctggaatgcctggtgagcatggtctgaagggcttttcgggacag
aaaggaacaataggtgatccaggacgacaaggtgtaaaaggacctcctggagctctaggt
ctaaaaggtgaaagagggttgatggggcctcccggtgaaaagccaatcatgcatatacca
ccacatatgaaagaggtcatcaagggacctaaaggtgaccatggaaaaatgggaaagtct
ggcttcactggtcctagaggtacaaaaggttttccaggtgttccaggaatggagggtaaa
gatggacatccgggtaagcccagttatacaaaaggtactacaggttttcccggagtagaa
ggatttccaggacaaaaaggaatgccagggtataaaggaaagtctggaattgaaggtttt
cctggaatgcctggacccaggggtgacaaaggcacgtctggtgcttatggacggactgga
gaatctggaatcaagggaataaaaggtgaatttggtcctaccatcagtcttccaggatca
acaggactgagaggtgaaactgggcttcctggaccttttggtgagaagggtctcataggt
aacactggagacagaggaagtcctggttttgatggcattgaagggatgaaaggctatcca
ggagaacctggaagagttggacgaccaggctctgaaggcctacaaggtttcccaggaacc
cagggtcagaagggctggcctggcgtgcctgggcaggcaggaacccctggaatccaaggc
caaccaggacaaaaaggatttcctggtcttaagggcatttttggattggatggcctaaaa
ggtcaaaagggtatcacgggtgttgcaggttctgacaacttgggtccttctggtgagcca
ggaacaaaaggagagagaggagagaccggcatccccagcacagaggctggtgtccccgga
gaggtgggattcaagggtttcattggagatccaggtaataagggtgaatctgggcatcct
ggtgtaccggggcctcggggtcaacaaggattctctgatataaaaggagtgcaaggcgac
tatggctttccaggccaacaaggacttccaggtttccctggccccagagggatcccaggt
gacccttctccatttggagcaaaaggacagaaaggaaatccaggtgattttggattgact
ggagaaaaaggagtccaggggggcgcaggacagaaaggaccgtcaggggaacctggagtg
tcaggaagaaaaggtgtaaatggagaaccaggaatgatgggattcccaggaaggcgtggt
tttgaaggtgataggggccctgttggacctaaaggagataccggacccccaggttttcct
ggcttacctggtgctaaaggacttccaccagttccacagaaactaccaggtgagagagga
ccacctggcccaatgggtattcaaggaccacagggacggagtggaaacttcggtcctgct
ggacctcctggtgattcagggatttggggtccaaagggtgaaaaaggcatgccaggtctc
cctggaataccaggaaatccaggcttccgtggagaccctggacaaatgggccaccctggt
ctacaaggcgaagaagggacgcgagggggtcctggttcatctggtcctatcggaatgcct
ggccgcagtgtcaatgttggctacctgctggtgaagcacagtcagtctgagcagattccc
atgtgccctgtgggcatgtccaagttatgggacggttacagtcttctgtactttgaggga
caggagaaggcccacaaccaagatcttggtctagccgggtcatgtctcccccgatttaac
accatgcccttcctatactgcaatcctggagacgtgtgctactatgccagccgcaatgac
aaatcctattggctgtccaccactgcaccaattcccatgatgcccgtggaggaggccgaa
ataaaaccatacatcagccgctgctccgtgtgtgaagctccatctgtggccatcgctgta
cacagtcaagatataacaatcccaatgtgcccagcaggctggagaagtctctggattggc
tactccttccttatgcacacggcagctggagatgaaggcggcggacagtctctggtgtct
ccaggctcctgtctagaagatttccgcaccactcccttcatcgagtgtaacggggccaag
ggtacgtgccactacttcgccaacaagcagagtttctggttgacatctatcgatcagacc
ttccagagttccccttcctctgagacactgaaagccggtcagctcttggcacgcatcagc
cgctgccaagtgtgtatgaagaacctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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