KEGG   Sinocyclocheilus grahami (golden-line barbel): 107575337
Entry
107575337         CDS       T04918                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sgh04121]
    107575337
   03036 Chromosome and associated proteins [BR:sgh03036]
    107575337
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sgh03037]
    107575337
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107575337
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107575337
  UBL E3 ligases
   107575337
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    107575337
Cilium and associated proteins [BR:sgh03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   107575337
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 zf-RING_5 zf-ANAPC11 Rad50_zn_hook zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 107575337
NCBI-ProteinID: XP_016117217
Position
Unknown
AA seq 923 aa
MMAPSKMKLRVRKRDSAGKSSQRLLANASPDSKCPICLDGFNNVASLDRCLHQFCFRCIH
EWSKNKAECPLCKQPFHSIIHSVKGENDFKEFVLRPPENGVPANADPPERVVRPRVLRSQ
ERRSHRAQNPAPSSSPPQEDDVMFDGLTDAAALAENQDVQQMVLRLTARRHGRGEGRSLR
RLRDQDVVAFRRALYRTGVRVRSSRDAGRQRDISAVFLRQNPGCLRRLLPWLQRELTVLY
GSHGSLVNIVQNIIISRIMNYNMEDSAIRDELRPFLLARTDHFLHELVSFARSTLNMEVY
DQQAVYDCPAPSYEEGSSSDLSVIAISEDDDDNDSEDNVTENPSAVQECLASVATASGVE
SLPSQSAWDDETPGPSYSTLLPSSSQSHGEGAEPSASTAPPLSALDMTDPVVSGRVSAGP
GEDDEEEECLIVGYVKPMAERTPELVQLSSDSSEEEQEPATTETMASVTKSEASQVQLPL
HSHMNPISPSSSPGSAPLCSPQHLHSDGVRSHSREQEVDYLSFRGHQSKDGSQSHSQQSR
GDSRCRGHKRHRSHRRSGSKEKDKSLEQSRHVKTPDCSPSQTQSWTQSPAVSVWSVSPAS
KSHSSDCSPSRNKSGEHSRHARERFSHSPANSRRRRTKERRSRSPDLDSFLGSHHPCEAK
RSRKRRKRSVSSSGADSHSEKSCLDKPSGKRKYKTRHLERAAQRQHKEGTTSKEKRHRER
RRSRERSPSVEIIYEQKPPDPYWVQRRKRKHRKRRRELRSPTVITIDSDSDRTIDCLDRV
MDVIDQTAADFEQRDETPKQESIQNSSYTLDSSNPLSEPSSPMGSSDPITERTLNLDDCV
VDVVDHSSSDCSRNMGASNHQEFIPNHFPVDSIIMAPPSDVRLLETILQDLVDFLPGAER
EMGRSSPGQQEPASRQQKDQSEI
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgatggcgccctctaagatgaagctgcgtgtgaggaagagagacagcgctgggaaatct
tctcagcgtttattggccaacgcgtcgcccgattccaaatgccccatctgcctcgacggc
ttcaataacgtggcgtcgctggaccgttgcctgcaccagttctgtttccgctgcatccac
gagtggtccaagaacaaagccgagtgtccgctctgtaagcagcccttccactccataatc
cactccgtcaaaggggaaaacgactttaaggagttcgtgctgcgtccgccggagaacgga
gtgcctgcgaatgccgatccgcctgagcgtgtggtccgcccccgagttctccgaagccag
gagaggcggagccacagagcacaaaaccccgccccttcctcttcccctccacaagaggat
gacgttatgttcgatggcctgacggatgctgcggcgctcgcagagaaccaagacgtgcag
cagatggtgctgcgattaacagcacgcagacatgggcgtggcgaggggcggagcttgcgg
cgtttgcgcgaccaagatgttgtggcgttccgacgcgcgctttataggaccggcgtgcga
gtgcgcagctcgagggacgctggcaggcagagggacatttctgccgtgttcttgcgacaa
aatcccggctgtttgcgacgactattgccttggctgcagcgagagctcacggtgctgtac
ggttcgcacggctcgctggtgaacatcgtgcagaacatcatcatctcacgcatcatgaac
tacaacatggaggactcggccatccgggacgagctccgccccttcctgctggcgcgcacc
gaccacttcctgcacgagctggtgagcttcgcccgctccaccctcaacatggaggtgtac
gaccagcaggccgtgtacgactgtcccgctcccagctacgaggagggcagcagctcagac
ctttctgttatcgccatctccgaggatgacgacgataatgacagtgaggacaatgtcaca
gagaatccctctgctgtccaggaatgccttgcatccgttgccacagcaagtggagtggaa
agtttgccaagtcagtcagcgtgggatgatgagacgcctggtccctcctattcaaccctc
ctcccctcttccagccaatcacatggcgagggggcggagccaagcgcaagcacagcccct
cccctcagcgccctggatatgactgaccctgtggtgagtggcagagtgtcagccggaccg
ggtgaagatgacgaagaggaagagtgcctgattgtgggatacgtgaaaccaatggccgaa
cgaactccagaacttgttcagctctcttcagactcgtctgaagaggagcaagagccagcc
accactgagacaatggcctcagtaacgaaatcagaggcatcccaagtgcagctcccatta
cattcccacatgaacccaattagccctagttcctccccaggctctgctcccttgtgcagt
ccacagcatttacactcggatggagtcaggtcacacagcagagaacaagaggtcgactac
ttgtccttccgtggtcaccagtccaaagatggttcacagtcacattcacagcagagtcga
ggtgactccaggtgcagaggtcacaagaggcacagaagtcatcggcgctctggcagcaaa
gagaaggataagagtttagaacaatctcggcacgtcaagaccccggattgctcaccaagc
caaacacagagctggacacaaagcccagcagtgtccgtttggagcgttagccctgcctct
aagtcacacagtagcgactgctctccttctcgaaataagagcggagagcattcgcgccat
gcgagagagagattctcacattctcctgccaactccaggaggaggagaaccaaggaaagg
aggagtaggtcacccgacttggactcgttccttggttcccaccatccctgtgaggcaaag
cgtagtcgtaaacggcgcaagcggtcggtcagcagcagcggcgctgattcacactccgaa
aaatcctgcctggacaaacccagtggtaaacgcaagtacaaaacccggcacttggagcga
gcagcccagcggcagcacaaggaaggaaccacaagcaaggaaaagcggcaccgagagcgg
cgacgaagcagggaacgatctccaagtgtggagataatctatgaacaaaagccgcctgac
ccgtactgggtccagcggaggaagaggaagcaccggaagcgaaggagggaactgcgttct
cccactgtgatcacgatcgatagcgacagcgaccgtaccattgactgtctggaccgcgtc
atggacgttatagaccaaaccgctgctgatttcgagcagagggatgagactcctaagcaa
gagtccatccagaactcaagttataccttggactcttcaaatcctctatccgagccttcg
agtcccatgggcagcagtgacccaattactgaacgcacactaaacctggacgactgtgtg
gtggatgtagtcgaccacagtagttccgactgctccagaaatatgggtgccagtaaccac
caagagtttatacccaaccatttcccagtggattcgataataatggcgccaccttcggac
gtgaggctgctggaaaccatactgcaagatcttgtggatttcctaccgggggcagagcgg
gaaatggggcggagttctcccggccaacaggaacccgcttctagacaacaaaaagaccaa
tcagagatttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system