KEGG   Sinocyclocheilus grahami (golden-line barbel): 107575482
Entry
107575482         CDS       T04918                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107575482
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107575482
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107575482
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgh04147]
    107575482
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107575482
Exosome [BR:sgh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   107575482
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107575482
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   107575482
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 DUF1194
Other DBs
NCBI-GeneID: 107575482
NCBI-ProteinID: XP_016117339
Position
Unknown
AA seq 1617 aa
MPYGRGKTYTGAALKFAKEHVFTKARGSRRDQHVQQVAVVITDGKSTDEVARAAAALRRS
GITIFALGIKDTEEDDLREIASYPYKKFVFNVEDFDKLNSLSNILTKTLCNEITDSIIPR
VSLSQSFVLQGCKQTTKADIYFLLDESGSISYDEFDDMKNFTKQWLEAFEVGNNHVRFGL
VKFASSATTAFRLHDYNTKADIEKAVNALIMEGGGTRTDLGLREMIPLFEEAVRTREEKV
RKLLIVITDGESRGTEESVEVPAKLLRTEQNVTIYAIGVKDASEPELELISGSPQRTFYV
KNYDFLDEIKKDIITEICSFEGCEGLFADVVFLLDGSESVSAKDFENMKYIMKLVIDRFV
IGPDKERVAVVQYGTDPKEEFSLNKFDDKAVLLQEIRNIKQKNGKTYTGKALKEVLQSFN
ISKGGRASALKFLILLTDGESWDDVSEPAKVLRDNLININAIGMRHANKSQILAIAGSHD
GVFFEDAVASPKELSNDILLKICNTECKTPELIDIIFLMDASGSPNKDGFQEMINLMKYT
VSKSVVGEKRVRFGAVTYSNNPHSEFTLKQYYSQTDILRVISNLKTSGGSRNTVRALNYT
LSYFGGTHGGRRAKNVPQVLFLITDGKVNDLSGLATWPESLANSEVNFFAIGTEDADAEQ
LKEMVGKKGTVHYAKTYQDLHGLQKRITQELCDLTKPICEMEVSDLVFLIDGSESIDEPS
WNTLKKTMIGIVKELDIAQDKWRVGVAQFSDILLHHFYLNTYTSFAEVEEAINKIRQRKQ
GTSTWDALRNIRYYFTRENGSRIDERVAQNLLLITDGKANDEKDLNALVYLRNKNITITA
IGIGDEIKKSELREIAGSADRVLIETFEGLELKTTIRKVLHLLCTDTRPIPQPPYDCDID
IAFGFDVSRRTSTQTLFRPQVEPLVSAAIHRISMMGDLCCIKKDKITTRFGYRLDRSVLN
DFGFEKYSEDVVKKVMSFQPTAPLAFNGVLLDSFRELLASSKAKAKVLIIFTDGLDDNIK
HLMASSERLKQSGVSALLIVSLEGIMDVHQLEFGRGSGYMQPLTINMLNLGNALMKQIET
VVLRKCCDVLCSCTGVPGPRGPPESLGQKGYKGQKGHPGFPGDEGSMGERGPPGLNGTQG
HSGCPGNRGIHGQRGYTGNKGEDGEDGLDGVDGEQGDAGLNGLPGPKGDPGSAGVKGFRG
SPGPDGHSGVRGDPGAPGIDNTIPGPKGERGDTGLPGDQGTVGPPGRKQFVFWXGAPGRK
GRPGLPGDSSNEKGEAGQRGIPGYPGQVGPPGSKGFQGDNGPPGAPGIQGPFGPPGPEGS
KGGRGSRGPRGPPGDPGPNGALGSEGFKGPLGQDGRDGYGPSGLKGHKGNIGYFGLPGLQ
GEDGTKGSSGSKGHKGYRGKPGNTGLEGPPGTPGENGMDGHRGEKGPPGISPMPECDLVE
HIRKNCPCCSGNGTRCPVYPTDLVIALDMSAGVTPQVFERMSSAALSLLEDISIAETNCP
WGARVSVISYSSESRNLIRFAEHLKKKSLLEAVRTFALERTTKTRDIGQAMSFVARNIFK
RVRKGRLMRKVAVFFTNGPSRDESSLATAMLEFKAADIGLGVIALNPADDVSRAMQL
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgccatatggtcgtggtaaaacatacactggagctgctctcaagtttgccaaagagcat
gtgttcaccaaagcaagaggcagcagaagagatcagcatgttcagcaggttgctgttgtt
atcactgatggaaagtcaacagatgaggtggccagggctgcggcagcattgcggcgatct
ggcatcactatatttgcgcttggtatcaaagacaccgaggaggatgacttgagagagatt
gcttcctacccatataaaaagtttgtattcaacgtggaagactttgataaactaaattca
ctttcaaatattttaaccaaaacactctgcaatgaaatcacagattccatcatacctaga
gtttcactctcacagagctttgttttacaaggttgcaagcaaacaaccaaagccgacata
tactttcttctggatgaatcaggaagtatatcctatgatgagtttgatgatatgaagaac
tttactaagcaatggcttgaagcatttgaggttggaaataaccatgtgcgctttggatta
gtaaaatttgcaagcagcgcaacaacagctttccgattacatgactataacacaaaagct
gatatcgaaaaggcagtgaatgccctcattatggagggagggggcaccaggactgatttg
gggttgagagaaatgatcccgctgttcgaagaagctgtacgaacacgtgaggaaaaagtt
cgtaagctcctgattgtcatcacagatggcgagtcaagagggacagaagagtcggtagaa
gtccctgctaaacttctgagaacagaacagaatgtcaccatttatgctattggtgtgaaa
gatgcatctgagccagagctggaattaatatctggcagcccacaaagaacattttatgtc
aaaaactatgatttccttgatgaaatcaagaaagacatcattacagaaatatgctccttt
gaaggttgtgaaggtctttttgcagatgttgtcttcctgcttgatggatcagaaagcgtt
agtgctaaggactttgaaaatatgaagtacataatgaagcttgtgatagataggtttgta
attggaccggacaaggagcgtgttgcggttgttcagtatggcacagacccaaaggaggag
ttttccttaaataaatttgacgataaagctgtattattacaggaaattagaaatattaaa
cagaagaatggaaaaacatacactggaaaagcacttaaagaagtattacaatctttcaac
atttctaaaggaggacgcgccagtgctttaaagttcttgatacttcttacagatggagag
agttgggatgatgtatctgagcctgctaaagtcttgagagacaatttaatcaacattaat
gctattggtatgagacatgcaaacaaatctcagattcttgccattgctggatcccatgat
ggagtgttctttgaagacgctgttgcatccccaaaagaattaagcaatgacatccttcta
aagatctgcaacacagaatgcaagacaccagaattgatcgatataatcttccttatggat
gcctccggaagtccaaataaagatggtttccaggaaatgataaacttaatgaaatatacg
gtgagcaaatctgtggttggagaaaaacgggtacgatttggcgctgtcacctactctaat
aaccctcattcagagttcacactaaaacagtactacagtcaaactgatattctgagggtt
atctcaaacctcaaaacttcaggaggaagcagaaacacggtccgagccctgaactataca
ctctcctactttggtggaacacatggtggacgacgggcaaagaatgttccccaagtgcta
tttctgattacagacggcaaggttaatgacttaagtggtctagcaacatggcctgaatcc
ctggcaaattcagaggtcaacttttttgctattggtactgaagatgcagatgcagaacag
ctaaaggagatggtgggaaagaaaggaacagtgcactatgcaaagacctaccaggatctg
catggactgcaaaaacggatcacccaagagctctgcgatcttaccaaaccaatttgtgag
atggaggtatcagaccttgtttttttaattgatggatcagagtctattgacgaaccaagt
tggaatactctcaaaaaaaccatgattggcattgtgaaagagctggatattgctcaagac
aaatggcgagtgggtgttgcccagttcagcgatatactcctgcatcacttttacctgaac
acatacactagttttgcagaagtggaggaagctataaacaaaattagacaacgaaagcag
ggcacaagtacttgggacgcactgagaaatattagatactacttcacaagagagaatgga
tccagaatagatgaaagagtcgctcagaatctcctgctgatcacagatggaaaagctaat
gatgagaaagacttgaacgcattagtgtatctcagaaacaagaacataactataactgcc
attgggattggcgatgaaataaagaaatctgaactgcgtgaaatagctggatcagctgat
cgggtccttattgagacttttgaaggccttgaactgaagacaaccataaggaaagtgtta
catttactctgtacagacacaagaccaataccacaacccccatatgactgtgatattgac
attgcctttgggtttgacgtgtccagacggacaagcacacaaactctgttcagacctcag
gtggaaccgttggtttctgcagccatccaccgtatctccatgatgggtgatctgtgctgc
atcaaaaaggacaagattacaactagatttggctataggctagataggagtgttctgaat
gattttggctttgagaagtacagcgaggatgtggtcaagaaagtgatgtcatttcaacct
acggcacccctggccttcaacggggttctgttagattccttcagagaattgttagcctcc
tccaaagccaaggcaaaggttttgataatcttcacagatgggttggatgataacattaag
catttaatggcaagttcagagagacttaagcaaagtggggtcagtgcactgctgattgtg
tctttggagggaataatggacgttcaccagctggaatttggcagaggttccggctacatg
cagccactgaccatcaacatgctaaatttaggcaacgctcttatgaaacagattgaaaca
gtagtgctgaggaaatgctgcgatgtgctttgttcatgcaccggtgtacctggaccacga
ggaccccctgaaagcttgggtcaaaagggatataaaggtcagaagggtcatcctggattt
ccgggagatgaaggtagtatgggagagcgaggaccaccagggctgaatggaactcaggga
cacagcggttgccctggaaacagaggaatacatggccagagaggctacactggaaataaa
ggagaagatggggaggatgggctggatggagtggatggagaacagggtgatgctggccta
aatgggcttccaggacctaaaggagacccaggcagtgctggtgtgaagggtttcagaggc
agtccgggacctgacggacacagcggagtaagaggagatcctggtgcaccaggaatagac
aacacaattccaggtccaaaaggcgagaggggagatactgggctcccgggtgaccagggc
actgttggacccccaggcagaaaacagtttgtattttggtagggtgctccaggaagaaaa
ggccgaccaggattgccgggtgactcttcaaatgaaaaaggagaagctggacagcgaggg
attcctggttatcctggacaagtgggaccaccaggctcaaaagggttccaaggagacaat
ggtcctccgggtgcacctggaattcagggtccctttggcccacctggacctgaaggatca
aagggaggtcgaggatccagagggccaaggggtccaccgggtgacccggggcccaatgga
gcactgggatcagagggattcaaagggcctctgggacaagatggaagagatgggtatgga
ccttctgggctcaaaggacacaagggaaacattggatactttggcctccctggtttgcag
ggtgaggatggtaccaaaggatccagtggaagtaaaggacataaaggttatcgaggaaaa
ccgggaaacactggtctcgaaggtcctccgggtactccaggagagaatgggatggacgga
cacaggggtgaaaaaggacctcctggaatcagtccaatgcctgaatgtgacctggtcgaa
cacatacgcaaaaactgtccttgctgctccggtaatggtacccggtgtccagtttacccc
acagacctggtgatagcattggacatgtctgcgggtgtgactcctcaagtgttcgagcgg
atgagttctgcggctctatctttattggaagacatttccattgctgaaacaaattgtcca
tggggagctcgagtatctgtgatctcctacagcagtgaatccaggaacctgatccgtttc
gcagaacaccttaagaagaagagccttctggaagctgtaagaacattcgctctagagaga
accacaaaaactagagacatcggacaagccatgagctttgtggcccgcaacatcttcaaa
cgtgtccgaaagggcaggctcatgaggaaagtggccgtgttcttcacaaacgggccgtcg
agggatgaatcgagccttgcaacagccatgctggagttcaaggctgcagacattggcctc
ggagtgatcgccttaaatcctgcggatgatgtgagccgagcaatgcagctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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