KEGG   Sphingopyxis granuli: SGRAN_1415
Entry
SGRAN_1415        CDS       T04372                                 
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
sgi  Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sgi03009]
    SGRAN_1415 (rimO)
Enzymes [BR:sgi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     SGRAN_1415 (rimO)
Ribosome biogenesis [BR:sgi03009]
 Prokaryotic type
  ribosomal protein modification factors
   SGRAN_1415 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM
Other DBs
NCBI-ProteinID: AMG73804
UniProt: A0AA86GKC7
Position
complement(1535370..1536740)
AA seq 456 aa
MPVKTLPAQPKVGMVSLGCPKALVDSERILTKLRADGYGLSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAMAENGRVIVTGCMGSEADLIRARFPKVLAVTGAHQYEQVVDAVHDAVP
PTQGPFVDLVPEGGLKLTPRHYSYLKISEGCNHSCSFCIIPDLRGRLVSRRIDAVLREAE
KLVAAGTKELLVISQDTSAYGVDIRHDPREWKGREVRAHMTDLARELGQLRTNEGRAPWV
RLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPKVLKAMKRPANEAKVLERLAAWRA
IAPDIAVRSSFVVGFPGETEEDFRYLLDWLDEAQLDRVGAFRFEPVAGAQANALPDPVPE
AVKEERYQRIMEKTAAISAAKLAAKVGRTLPVIIDEVGEADEDGSIGATGRSQADAPEID
GHVYLRDVAAGLKAGDIVDVLVEDADEHDLFGVVTA
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgccagtcaagaccctccccgcccagccgaaagtcggcatggtttcgctcggctgcccg
aaggcgctggtcgacagcgaacgcatcctgacgaaattgcgtgccgatggctatggcctg
tcgcccgattacgccggggccgacgtggtgctcgtcaatacctgcggcttcctcgacagc
gcgaaggaggaaagcctcgaggcgatcggcgaggcgatggcggagaacggccgcgtcatc
gtcaccggctgcatgggcagcgaggccgatctgatccgcgcccgcttcccgaaggtgctc
gcggtcaccggggcccaccagtatgagcaggtggtcgatgcggtccacgacgccgtgccg
ccgacgcagggcccgttcgtcgacctggtgccggagggcgggctcaagctgaccccgcgc
cactacagctatctgaagatcagcgagggctgcaaccacagctgttccttctgcatcatc
cccgacctgcgcggtcggctggtcagccgccgcatcgacgcggtgctgcgcgaggcggag
aagctcgtcgcggcggggacgaaggaactgctggtgatcagccaggacacctcggcctat
ggcgtcgacatccgccatgatccgcgcgagtggaaggggcgcgaggtgcgcgcgcacatg
accgacctcgcgcgcgaactcggccagcttcggacgaacgaaggtcgtgcgccgtgggtg
aggctgcactatgtctatccctatccgcacgtcgatgcggtgatcccgctgatggcggag
gggctgctcaccccctatctcgacattcccttccagcatgcgagcccgaaggtgctgaag
gcgatgaagcgccccgcgaacgaagcgaaggtgctcgaacggctggccgcgtggcgcgcg
atcgcgcccgacatcgcggtgcggtcgagcttcgtcgtcggcttccccggcgagaccgag
gaggatttccgctatctgctcgactggctcgacgaggcgcagctcgatcgcgtcggtgcc
ttccgtttcgagcccgtcgcgggcgcgcaggcgaacgccctgcccgatccggtgccggag
gcggtcaaggaagagcgctatcagcggatcatggaaaagaccgccgcgatcagcgccgcg
aagctcgcggcgaaggtcggccgcaccctccccgtcatcatcgatgaggtgggcgaggcc
gacgaggatggcagcatcggcgccaccggccgcagccaggccgacgcgccggagatcgac
ggccatgtctacctccgcgacgtcgccgcggggctgaaggcgggcgacatcgtcgacgtg
ctggtcgaggacgccgacgagcatgacctgttcggggtcgtgaccgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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