KEGG   Sphingopyxis granuli: SGRAN_1478
Entry
SGRAN_1478        CDS       T04372                                 
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
sgi  Sphingopyxis granuli
Pathway
sgi00300  Lysine biosynthesis
sgi00550  Peptidoglycan biosynthesis
sgi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SGRAN_1478 (murE)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SGRAN_1478 (murE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sgi01011]
    SGRAN_1478 (murE)
Enzymes [BR:sgi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     SGRAN_1478 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:sgi01011]
 Precursor biosynthesis
  Amino acid ligase
   SGRAN_1478 (murE)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase VP1_protrusion
Other DBs
NCBI-ProteinID: AMG73865
UniProt: A0AA86GKE1
Position
1608228..1609667
AA seq 479 aa
MRLSALLDPPGPSGADPVVTGLAIDHRKVAPGTIFGAFVGERFNGEDFIPAAIAAGAIAV
VARPGATVTGAVHIADPNPRRAFAHIAARFFHRFPATCVAVTGTNGKTSTVEMTRQLWRM
AGFHAASIGTLGITTSNDSASTGLTTPDIVTFLSNMAGLAAEGVTHAAFEASSHGLDQYR
TEGVPVKAAAFTNLSHDHLDYHGDMDAYLAAKMRLFREVVDPDGVAVIWADDLWSAAAEY
EAKQRGLRIMTIGRKGETLRLVAREPTQLGQSLTIAAGPLAQKVTLPLIGAYQAANALVA
AGLVIATGGDVQQTLANLARLQPVRGRLERAAITRAGAPVYVDYAHTPDAIAAALDALRP
HAGGRLILVFGAGGDRDRDKRPEMGRVAAAGADVLIVTDDNPRGEDPAAIRAAIAAGAPD
ARVIGDRRAAIAAAIAEARAEDIVCIAGKGHEQGQIVGGGAAARVIPFDDVAVAREAAA
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgcgtctctcggcgctcctcgacccgccgggcccctcgggtgccgacccggtcgtcacc
gggctcgccatcgaccaccgcaaggtcgcgccgggcacgatcttcggcgccttcgtcggc
gaacggttcaacggcgaggatttcatccccgccgccatcgcggccggcgcgatcgccgtg
gtcgcgcggccgggggcgacggtgacgggcgcggtgcacatcgccgaccccaacccgcgg
cgcgccttcgcgcacatcgcggcgcgcttcttccaccgctttccggcgacctgcgtcgcg
gtcaccggcaccaacggcaagacctcgacggtcgagatgacgcgccagctctggcgcatg
gcgggcttccacgccgcctcgatcggcacgctgggcatcaccacctcgaacgacagcgcg
tcgaccgggctgacgacgcccgacatcgtgaccttcctgtcgaacatggcggggctcgcc
gccgagggcgtgacgcacgccgcgttcgaggcgtcgagccacggcctcgaccagtatcgc
accgaaggggtgccggtgaaggcggccgccttcaccaacctcagccacgatcatctcgac
tatcacggcgacatggacgcctatctggcggcgaagatgcggctgttccgcgaggtggtc
gatccggacggcgtcgcggtgatctgggccgacgatctgtggtcggcggccgccgaatat
gaagcgaagcagcgcggcctgcggatcatgacgatcgggcgcaagggcgagacgctgcgg
ctcgtcgcgcgcgagccgacccagctcggccagtcgctgacgatcgccgcgggcccgctc
gcgcaaaaggtcacgctgcctctgatcggcgcatatcaggccgccaatgcgctggtcgcg
gcggggctcgtcatcgcgaccggcggcgacgtgcagcagacgctggccaatctcgcccgg
ctccagccggtgcgcggccgcctcgaacgcgcggcgatcacccgcgcgggcgcgccggtc
tatgtcgattatgcgcacacgcccgacgcgatcgccgcggcgctcgacgcgctgcgcccg
catgcgggcgggcggctgatcctcgtcttcggcgccggtggcgaccgcgaccgcgacaag
cggcccgagatgggccgggtggcggccgccggggccgatgttctgatcgtcaccgacgac
aatccgcgcggcgaggaccccgccgccatccgcgccgcgattgccgcaggcgcgcccgat
gcgcgcgtgatcggcgaccgccgcgccgcgatcgccgccgcgatcgccgaggcgcgcgcc
gaggatatcgtctgcatcgcgggcaaggggcacgagcaggggcagatcgtcggcggcggt
gccgcggcgcgcgtcatccccttcgacgacgtcgccgtcgcgcgggaggcggcggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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