KEGG T00691: SGR

Streptomyces griseus: SGR_4825

Entry

SGR_4825 CDS T00691

Definition

exodeoxyribonuclease V

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

sgr Streptomyces griseus

Pathway

sgr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:sgr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 HHH_5 AAA_11 Helicase_RecD AAA_22 PIF1 PhoH UvrD_C AAA_16 AAA_10 HHH_2 AAA_28 AAA DUF87 TrwB_AAD_bind AAA_12 DUF258 DAP3

Other DBs

NCBI-GI:

NCBI-GeneID:

Kitasato:

UniProt:

Position

5672886..5675111

AA seq 741 aa
MSNMAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGESLRMEGRWG
SHAQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIERE
PKRLVEVPGLGPKRTKMIATAWEEQKAIKEVMVFLQSVEVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCFLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPDGGEPITAVYLVPFHRAELSLAG
QVRRLLKTGEDRMPAFRDVDWDKALAWLATRTGATLAPEQEQAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLGDLLAE
GGPVPAVRLTRIFRQAQQSGVVTNAHRINAGQPPLTEGLSDFFLFVEDETEDAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAITPGRPDLPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTGLDVDEQRLTVHTDEDEEIGYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFA

NT seq 2226 nt +upstreamnt +downstreamnt
atgtccaacatggccgtcctcgaaggtgtcctggagcggatcacctacgccaacgaggag
aacgggtacacggtcgcccgcgtcgacaccgggcggggagcgggcgacctcctcaccgtg
gtcggcgctctgctcggcgcgcaggtcggcgagtcgctgcggatggagggccgttggggc
tcgcacgcgcagtacggcaagcagttcaccgtggagaactacaccaccgtgctgcccgcc
accatccagggcatccgccgctatctcggctcggggctgatcaaggggatcgggccggtg
atggccgaccggatcaccacccacttcggcgtcgacaccctcgacatcatcgagcgggag
ccgaagcgcctcgtcgaggtccccggcctcggccccaagcgcaccaagatgatcgccacc
gcctgggaggagcagaaggcgatcaaggaggtcatggtcttcctccagagcgtcgaggtc
tccacctccatcgccgtccgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgac
cggatcgcccaggccgtcggcatcccgcacgacagccccgagcgggtcaaggccggcctc
cagtacgccctgtcccagtcctccgaccaggggcactgcttcctccccgaggagcggctc
atcgcggacggcgtcaagctgctccaggtcgacaccgggctggtcatcgagtgcctggcc
gagctggccgccgacccggagggcgtcgtacgggagaaggtgccgtcccccgacggcggc
gagccgatcaccgccgtctacctcgtccccttccaccgtgccgagctgtccctcgccggg
caggtgcgccgcctgctgaagaccggcgaggaccgcatgccggccttccgggacgtggac
tgggacaaggccctggcctggctcgccacccgtacgggagccaccctcgcgcccgaacag
gagcaggccgtacggctcgcgctcagccggaaggtggccgtcctgaccggcggccccggc
tgcggcaagtcgttcaccgtacggtccatcgtcgaactggcccgggcgaagaaggccaag
gtggtgctcgccgcccccaccgggcgcgccgccaaacgcctctccgagctgaccggggcc
gaggcgtccaccgtgcaccggctcctggagctgaagccgggcggggacgccgcctacgac
cgggaccgcccgctggacgccgatctggtcgtggtggacgaggcgtcgatgctcgacctg
ctgctcgccaacaagctcgtgaaggcggtggcacccggtgcccacctcctcctcgtgggc
gacgtcgaccagttgccctcggtcggcgcgggggaggtgctgggcgatctgctcgcggag
ggcggcccggtccccgccgtccggctcacccggatcttccgccaggcccagcagtccggc
gtggtcaccaacgcccaccggatcaacgccgggcagccgccgctcaccgaggggctcagc
gacttcttcctcttcgtggaggacgagaccgaggacgcgggcaagctcgccgtcgatgtg
gcggcccgtcgcattccggccaagttcggcctcgatccccgccgtgacgtgcaggttctc
gccccgatgcaccggggtccggcgggcgcggggaatctgaacgggctgctccagcaggcc
atcaccccgggccgtcccgatctccccgaaaagcggttcggcggccgggtcttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcacggtcggcgtcgtcaccggcctcgacgtcgacgaacagcggctcaccgtccacacc
gacgaggacgaggagatcgggtacgacttcgacgaactggacgagctggcccacgcgtac
gccatgaccatccaccgctcccagggcagcgagtatccggccgtcgtcatccccgtcacc
accagtgcctggatgatgctccagcgcaacctgctctacacggccgtgacgcgggccaag
aagctggtggtgctggtcgggtcccgtaaggcgatcggtcaggcggtccgcacggtttcc
gcaggcaggcgctgtacggcactggatttccggctccggggcggctccggagaagacttc
gcgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   KITASATO-SGR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

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