KEGG   Staphylothermus hellenicus: Shell_1338
Entry
Shell_1338        CDS       T01249                                 
Name
(GenBank) tRNA intron endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
shc  Staphylothermus hellenicus
Brite
KEGG Orthology (KO) [BR:shc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shc03016]
    Shell_1338
Enzymes [BR:shc01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     Shell_1338
Transfer RNA biogenesis [BR:shc03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    Shell_1338
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N tRNA_int_end_N2
Other DBs
NCBI-ProteinID: ADI32430
UniProt: D7D9I4
Position
1290832..1291380
AA seq 182 aa
MKTETCKGYLLYNRVIVPEYDCANKIYWNGYYGSFLGIQKPRNKNIQAPLELSIIEALYL
FEKKTLDIYMGNKKVEENELYTIGNKYIERFKELYIVYKDLRERGFIVRRGLKFGCDYLI
YRFGPGIDHAPFGVEVFLSSEKYDPIDIVRIGRLLHSVRKKLIIAIVSGEQIKYVLLSWW
KP
NT seq 549 nt   +upstreamnt  +downstreamnt
atcaagacggagacctgtaaaggctatctcctctataaccgtgtaattgttcccgaatat
gattgtgcaaataaaatatattggaacggctattatggttcattcctaggaatacaaaaa
cctagaaataaaaatattcaagcaccactagaattatccattattgaagcactatatttg
ttcgagaaaaaaaccctagacatctacatgggaaataaaaaagtagaagagaacgagcta
tatactataggaaacaagtatattgaaagatttaaggagctctacattgtttataaagat
ctaagagaacgtggatttattgtaagacgaggactaaaatttggctgtgattacctgatc
tacaggtttggtccaggaatagatcatgccccatttggtgtcgaagtatttttatcaagc
gaaaaatatgatccaatagacattgttagaataggccgcctattacattctgtgaggaaa
aaactgataatagcaatagttagtggtgaacaaataaagtatgtattattatcttggtgg
aaaccatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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