KEGG   Sulfuritalea hydrogenivorans: SUTH_00253
Entry
SUTH_00253        CDS       T03591                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
shd  Sulfuritalea hydrogenivorans
Brite
KEGG Orthology (KO) [BR:shd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shd03400]
    SUTH_00253
Enzymes [BR:shd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SUTH_00253
DNA repair and recombination proteins [BR:shd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SUTH_00253
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_22
Other DBs
NCBI-ProteinID: BAO28070
UniProt: W0SBD9
Position
258589..260568
AA seq 659 aa
MVKLNAAQLEAVRHLDGPLLVLAGAGSGKTRVITHKIAWLVDDYGVKPSQIAAITFTNKA
AKEMKERVGKLIGGRAEGLTVSTFHALGVRILRQEAASVGLKPGFSILDAADTTALFQEL
AGNIDKGRLRALQSRISLWKNMLVDPAAALQDAADEIEATAAKLYVDYERTLRAYQAVDF
DDLIRLPVTLFAEHDAVAQRWRSRIWHLLVDEYQDTNRCQYRLVQLLTQGRDSFTAVGDD
DQSIYAWRGADSENLRLLKDDYPALKVIKLEQNYRSTSRILHAANTLIANNPKLFEKKLW
SEHGQGDAIHIQTCRDGEHEAEWVGSRLSAHRFERRTKFSDYAILYRGNHQARVIEQQLR
AQRIPYVISGGQSFFDRAEIKDITCYLRLLANQDDDPAFIRAVTTPKRGIGGTTLEGLGR
AAGRSHQSLFAGIYAPGLDADLNTKQRTALREFGDFINRIEARAAKEPAGQVLNDLIRAI
GYESWLFESLDVREAETKWANVCDFVEWLGRKGEEEGKTLLELAQSVALLSMLDKGDEEQ
DAVQLATLHAAKGLEFRHVFLVGVEEGLLPHRDSIEPAKLEEERRLMYVGITRAQASLTV
TWCEKRKQGRESMPREPSRFIVEMGEAAQKASEQRNTVPDADTARAKASALRAMLAAKR
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggttaaactgaacgcggctcaactcgaggctgtgcgccatctcgacggcccgctgctg
gtgctggccggcgccggctcggggaagacgcgcgtcatcacgcacaagatcgcctggctg
gtcgacgactacggcgtcaagccctcgcagatcgccgcgatcaccttcaccaacaaggcg
gcgaaggagatgaaggagcgcgtcggcaagctgatcggcggccgcgccgaaggcctgacc
gtcagcacctttcacgcgctcggcgtgcgcatcctgcgccaggaggcggcatcggtcggg
ctcaagcccggattttcgattctcgatgcggccgacaccacggccctgtttcaggaactc
gcgggcaatatcgacaagggccggctgcgcgccctgcaatcgcgcatctcgctgtggaag
aacatgctcgtcgatccggcagccgcgctgcaggatgcggcggacgagatcgaggcaacc
gcggcgaagctctacgtcgactacgaacgcaccctgcgtgcctaccaggcggtggacttt
gacgacctgatccgcctgccggtgacgctgttcgctgagcacgacgcggtcgcgcaacgc
tggcgcagccgcatctggcacttgctggtggacgaataccaggacaccaatcgctgccag
taccgcctggtccaattgctgacgcaagggcgcgattccttcaccgcggtcggcgacgac
gaccagtcgatctacgcctggcgcggcgccgacagcgagaacctgcgcctgttgaaggac
gactacccggccctgaaagtgatcaagctggagcagaactaccgctccacctcgcgcatc
ctgcacgccgccaacacgctgatcgcgaacaaccccaagctgttcgagaagaagctgtgg
tccgaacacgggcagggtgatgcgatccacatccagacctgccgcgacggcgagcacgaa
gcggaatgggttggctcgcgcctgtccgcgcatcgcttcgagcggcgcacgaaattttcc
gactacgccatcctctatcgcggcaaccaccaggcgcgcgtgatcgagcagcagttgcgc
gcgcagcggattccctacgtgatctccggcggccagtccttcttcgaccgcgccgaaatc
aaggacatcacctgctacctgcgcctgctggccaaccaggacgacgatccggccttcatc
cgcgccgtgaccacgcccaagcgcggaatcggcggcaccacgctggaaggtctcggccgt
gcagccgggcgcagccaccagagcctgttcgcaggcatttacgctccgggtctggatgcc
gacctcaataccaagcagcgcacggcactgcgcgaattcggcgacttcatcaatcgcatc
gaggcgcgcgcggccaaagagccggccggccaggtgctcaacgacctcatccgcgccatc
ggctacgagagctggctgttcgagtcgctcgacgtgcgcgaggccgaaaccaagtgggcc
aacgtctgcgacttcgtcgagtggctgggccgcaagggcgaggaggagggcaagaccctg
ctcgaactggcgcagtccgtggcattgctgtcgatgctggacaagggcgacgaagaacag
gacgccgtgcagctggctaccctgcacgcggccaagggcctcgaattccgccacgtgttc
ctggtcggcgtcgaggagggcctgctgccacatcgcgactcgatcgaaccggccaagctg
gaagaggagcgccgcctgatgtacgtcggcatcacgcgggcgcaggccagcctgaccgtg
acctggtgcgagaagcgcaagcaggggcgggaatccatgccgcgcgagccttcgcgtttc
attgtcgaaatgggcgaagcggcgcagaaagcctcggaacaaaggaacacggtacccgat
gccgataccgcccgcgccaaggcgagcgccttgcgggccatgcttgccgcaaagcgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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