KEGG   Shewanella sp. MR-4: Shewmr4_0018Help
Entry
Shewmr4_0018      CDS       T00388                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:4.2.1.17 1.1.1.35)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
she  Shewanella sp. MR-4
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:she00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Shewmr4_0018 (fadB)
   01212 Fatty acid metabolism
    Shewmr4_0018 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Shewmr4_0018 (fadB)
   00650 Butanoate metabolism
    Shewmr4_0018 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Shewmr4_0018 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Shewmr4_0018 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Shewmr4_0018 (fadB)
   00310 Lysine degradation
    Shewmr4_0018 (fadB)
   00380 Tryptophan metabolism
    Shewmr4_0018 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Shewmr4_0018 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Shewmr4_0018 (fadB)
   00281 Geraniol degradation
    Shewmr4_0018 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Shewmr4_0018 (fadB)
Enzymes [BR:she01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Shewmr4_0018 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Shewmr4_0018 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Shewmr4_0018 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Shewmr4_0018 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(21173..23323)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCEA
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRQRKMSPLTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVVEQAATKGRSDALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRTLAANNGSYYQA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaaacaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaacgccgtattcaacaaactcgaagat
ttacctttcccaaccgcttcagcgattaaaggtttcgccctaggcggcggttgtgaagct
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggcctgcccgaaacc
aaactgggcattatcccaggctttggtggcacagtgcgtttaccacgtgtgataggtgcg
gataacgcccttgagtggatcaccacgggtaaagatcagcgtccagaagatgccttaaaa
gtcggtgcggttgatgcagttgttgcgccagaggctttagaagccgccgccattcaaatg
ctaaaagatgcagttgcagaaaagcttgattggcaagcccgtcgccaacgtaagatgtca
ccactgaccttaccaaaactcgaagccatgatgtctttcactaccgctaaaggcatggtg
tttgcggttgcgggtaaacactacccagcacctatggcggcagtcagcgttgttgaacaa
gcggcgaccaaaggccgcagcgacgcactgcaaattgaacatcaggcgtttatcaagtta
gcgaaaaccgatgtagccaaggcgttgatcggtatcttcttgaatgaccaattagtcaaa
ggcaaagctaaaaaagcgggcaaactcgctaaagatgtgaaaagcgccgccgtattaggt
gctggcatcatgggtggcggtatcgcttaccaaagcgccagtaaaggcacgccaatagta
atgaaggatatcgctcaacctgcattagatttaggtttaggcgaagccgctaaactgtta
tctgcgcaagttgctcgcggccgctctaccccagaaaaaatggctaaggtgctgaacaac
atcactccagccttagactatgctccagttaaacatgctgacgtggttgtcgaagccgta
gttgagcatccaaaagtgaaggcacaagtactggcggaagttgaacaatacgtgagtgaa
gatgcgattatcgcctctaacacgtcaactatttcaatcaacctgctagcaaagagcatg
aagaagcctgagcgtttctgcggtatgcacttcttcaaccctgtgcacaaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgttgcctac
gccagcaaaatgggtaaaaccccaatcgttgttaacgattgcccgggtttcttcgttaac
cgcgtactcttcccttactttgcaggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgataaagtgatggaaaaacaattcggctggccaatgggccctgcttacctg
ctagacgttgtcggcctagacacggggcaccacgcgcaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaatctggcaatgacgcgattgacgtgatgttcgagaacaaacgt
ctcggtcagaagaatggtaaaggtttctacgcttactctgtagatagccgcggtaagcca
aagaaagatgtcgacccaaccagctacgagctgctgaaagccgcctttggtgagcaaaaa
gcattcgatgcggatgagatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcttcacctgccgaagcggatatgggcttggtctat
ggtttaggtttccctccattccgtggtggtgtattccgttacttagatactatgggcgta
gccaactttgtcgccttagctgataaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgcacccttgcagccaacaacggtagctactaccaagcctaa

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