KEGG   Shewanella sp. MR-4: Shewmr4_0623
Entry
Shewmr4_0623      CDS       T00388                                 
Name
(GenBank) ATP-dependent helicase HrpB
  KO
K03579  ATP-dependent helicase HrpB [EC:5.6.2.6]
Organism
she  Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:she00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Shewmr4_0623
Enzymes [BR:she01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Shewmr4_0623
SSDB
Motif
Pfam: HrpB_C DEAD Helicase_C ResIII AAA_30
Other DBs
NCBI-ProteinID: ABI37703
Position
720045..722552
AA seq 835 aa
MNNLPIHSLLPSLRDAFAKHAQVILEAPTGAGKSTALPLAMLDWPEISGRILMLEPRRVA
ARSVAQFIASCRQQAVGQEVGYRVRGESKVSGETRLEIVTEGILTRMIQQDPELTGIEMI
IFDEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLTLAELMPDAALLQSEGRS
FPVEIFYRPVAGQQHWLDHLSRVVLDAATSVGDKGPQDILVFLPGKAEILRVAQYLEERL
DSSHVAVCPLYGELSAQEQDRAIKADSSRRKIVLSTNVAESSLTIEGIGLVIDSGYKRQA
SFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGECIRLWGQEEHQRLLKADEPEISQAD
LVAMAHDCAYWGAKSFSDLLLLTAPPTVNEALAWQLLQRLGMVDEQNKLTAHGKAAYEQG
CHPRLAHMLLVAKSRDEHQLAALACLLAGILEARGLPRKGADIMNYLHFATQGSAGQQAK
QWLKKLALDKQCTQADLVAIASHAHHQDVGLLLALAYPDRIAKSRGVEGYQLANGTGVVL
NAEDALAQTPWLVVADFQETEGKNAGRIYLASPLSPSLFDEELAELVERYDQCGWDEAKG
RAVAERQTKVGQILLKSEAIANPNRGQIVAALLSYIRQQGLQILNWHDNLAQFQARLQLA
RDLDPNADWPDMSDTALLANLETWLAPYLENVNNLPQLQKLDCFSLLVNQLTWSQQQALD
ALLPTSWPLATGTFAPILYDASGRALLRVRLQETFGMADSPLLAQGKLKVTMELLSPAQR
PLALTADLASFWQGPYVEVKKEMRGRYPKHLWPDDPANTQPTKFTKKKTLGLSQS
NT seq 2508 nt   +upstreamnt  +downstreamnt
ttgaacaatctacccattcattccttattgccatccctgcgcgatgcctttgcgaaacat
gcgcaagtgatcctcgaagcgccaacgggtgcgggtaaatcgaccgcattgcccttagcc
atgctggattggcctgagatttctgggcggattttaatgctggaacctcggcgtgtggcc
gcccgtagcgtggcgcaatttattgccagttgtcggcagcaggcggtagggcaagaggta
ggttatcgcgtacgcggcgagtcaaaggtcagtggtgagactcgacttgagattgtcacc
gaagggattttaactcgcatgatccagcaagatcctgaattaacaggcatcgagatgatc
attttcgacgagatccacgagcgacatttgaccacagatctcggtttagccttggcgctc
gaagtgcaaagctcactacgggatgacttaaaaatcctcgccatgtcggcaaccttatct
ggcctgacattggccgagttgatgcccgatgccgccctgctacagagtgaggggcgcagt
ttcccggtcgaaatattttatcgccccgttgctgggcagcagcattggctcgatcatctg
agccgcgttgtgctcgatgccgcgacatccgtaggcgataaggggccacaggatattttg
gtgtttttgcccggtaaagccgaaatcctccgagtggcgcagtatctagaagagcgcctc
gatagcagtcacgtggcggtgtgcccactctatggcgagctatcagcgcaggaacaagac
agggcgataaaggccgatagcagtaggcgcaaaattgtgctctcaaccaacgtggccgag
tcgagcttgaccatcgagggcattggccttgttatcgacagcggttataaacgccaagcc
agctttaatcctaaaactggggtgacacgtttaagccttaagcgcatcagccaagcctcg
gcaacccagcgtgctggccgtgcggggcgtttagcggctggcgagtgtatccgtttatgg
ggccaagaggagcatcaacgtctgctcaaggccgatgagcccgaaatcagccaagccgac
ttagtcgccatggcccacgactgtgcctactggggcgcgaaatccttcagcgacttactg
ttattgactgcgccgcccacggtgaacgaggcattagcttggcaactgcttcagcgttta
ggcatggtcgatgaacaaaacaagctgactgcgcatggcaaagcggcctatgagcagggg
tgtcatccgcgcctcgcccatatgttattggtggccaaatctcgcgatgaacatcaactg
gcggccttagcctgtttactggcggggattttagaagcgcggggattgccacgcaaaggc
gcagatatcatgaattatttgcactttgccacccaaggcagtgcggggcagcaggccaaa
caatggcttaaaaagctggcgctagataagcaatgtactcaggccgatttagtggccatc
gcctcccatgcccatcatcaggatgtcggtttgctgttggcgctggcttatccagaccgg
attgccaaatcccgtggcgttgaggggtatcaattggccaatggtacgggcgtggtgctc
aacgccgaagatgccttagcgcaaacgccttggctggtggtggctgattttcaagaaacc
gaaggtaagaatgccgggcggatttatctcgctagtccattatcgccaagtctgttcgat
gaggaattggccgagctggtggagcgttatgaccaatgcggctgggatgaagccaagggc
cgcgctgtggccgaacgccaaaccaaagtcgggcagattttattgaaatcagaggctatc
gctaatccgaatcgcggccaaattgtggcggcattactgagttacattcgtcagcagggg
ttacaaatccttaattggcacgataacttagcgcagtttcaggctcgattacagttagcg
cgcgatttagatccgaatgccgattggccggatatgagcgataccgcgctgctggcaaac
cttgaaacatggctggcgccctaccttgaaaatgtgaataatctgccgcaattacaaaaa
ctcgattgctttagtttgctggtaaaccaattaacttggtcgcagcagcaggcgctcgat
gcgctgctgcccacctcatggccgttagccacgggcaccttcgcgccgatattgtacgat
gcctcggggcgagccttgctgcgggtacgtttgcaggaaacctttggcatggctgacagc
ccgctactggctcaaggtaagctgaaggtgacgatggaattgctgtcaccggcgcagcgc
cccttggctctaacagcggatctcgcgagtttttggcaagggccctatgtggaagtgaaa
aaagaaatgcgtgggcgttatcctaaacacctgtggccggacgaccctgccaatacgcag
cccacaaaatttaccaagaagaaaaccttaggtttatctcagtcatag

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Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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