KEGG T00388: Shewmr4

Shewanella sp. MR-4: Shewmr4_1433

Entry

Shewmr4_1433 CDS T00388

Definition

DNA topoisomerase III (EC:5.99.1.2)

Orthology

K03169

DNA topoisomerase III [EC:5.99.1.2]

Organism

she Shewanella sp. MR-4

Class

SSDB

Motif

Pfam:

Topoisom_bac Toprim

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1675222..1677342

AA seq 706 aa
MILYIAEKPSLGRAIADVLPKPHKKGDGFIEDANGNCVSWCVGHLLEQAEPDAYNPEFKS
WKFEHLPIVPEKWQLKPKAATRSQLTVLKKLVKQADTLVNAGDPDREGQLLVDEVIAYLG
VTGDKLQQTQRLLISDLNPQAVKRALSQLRSNREFIPLSTSALARSRADWLYGMNMTRAY
TIQGKKVGYQGVLSVGRVQTPLLGLIVRRDEEIANFQSKPFYEVLAHLVTDKDQAFTAKW
QPSEACLPYMDEEGRVLAKGLAQNVVRRITDKPAKVTQLSTKDKQQNPPLPYSLSALQID
AAKRFGMSAKDVLDTCQSLYERHKLITYPRSDSRYLPTEQHGLASGVLAAITGGAPELVA
HAEAPNPRLKSKAWDDKKVDAHHAIIPTEKQPNLAGLSQRERQLYLHIARQYLAQFYPAY
CYSETAVEVTIEGGLFKTKAKQDKSLGWKQLFAREENERKDASSAASFAQGDKDTEEGEY
LGQLPPLTLGQVLHCHQGELVEKQTQPPKAFTDATLLSAMTGINRYVTDPEIRKILKETD
GLGTEATRAGIIELLFKRGFIQRQGKSIVATEVGKGLINSLPLSATTPDMTALWEASLNG
ICHKEISYQGFMQPLLGTLNNLIENAGAQLPSALNGLKGQGFKRAATKKSGYRKAGAKGA
GWKKSGTKNAAVGSSAAKTTAAKSTVSTSGTPTTPRRRASKAPAQA

NT seq 2121 nt +upstreamnt +downstreamnt
atgatcctctatattgctgaaaaaccaagcctagggcgtgcaatcgccgatgtgctgcct
aaaccccacaaaaaaggtgacgggtttatcgaagacgcaaacggtaactgtgtgtcttgg
tgtgtcgggcacttgctcgaacaggctgagcccgatgcctataatcccgagtttaaatcg
tggaagtttgagcatttacccatagtgccagagaagtggcagcttaaacctaaggccgcg
acccgcagccaactcacagtacttaaaaagctggtgaagcaggccgatactttagtgaat
gcgggtgatcccgacagggaagggcagttattggttgatgaagtgatcgcctatttgggc
gtgacgggcgataaattacagcaaacgcagcgactccttatcagcgacttaaacccgcag
gcggtgaaacgtgccttgtcacaactccgcagtaatcgtgagtttattcctttgtcgacc
tcggcacttgccagaagccgcgccgattggctctatggcatgaatatgacgcgggcctac
actattcaagggaaaaaggttggctatcagggcgtactatcggtcggccgagtacagacc
ccgctgcttgggcttatcgtgcgccgcgatgaggaaatcgcaaattttcaatctaagcct
ttttatgaggttctggcccacttagtgacggacaaagatcaggctttcacggcgaagtgg
caacccagtgaagcctgtttaccctatatggatgaggaagggcgcgtgctcgctaagggc
ctagcacaaaatgtggtgcgtcggatcaccgataaacccgccaaagtgacccagttaagc
actaaggataagcagcagaatccgcctttaccctatagtttatcggcgctgcaaatagat
gccgccaagcgcttcggtatgagcgccaaggacgtgctcgatacctgccagagcttatac
gagcgccataagctaatcacttatccacgctcagacagtcgttatttgcccaccgagcag
catgggcttgcaagtggggtattagcggccattacgggcggtgcgcccgagttagtcgca
catgctgaggcgcccaatcctcggcttaaatctaaggcgtgggatgataaaaaagtcgat
gctcaccacgccattattccaacggaaaaacagcccaatctagctggtttaagccagcgg
gaaaggcagctttatctgcatattgctcgccagtatttggcgcagttttaccctgcctat
tgctacagtgaaaccgcggtcgaagtgacgatcgaaggtggcctttttaaaactaaggca
aaacaggataagtctctcggttggaaacaactgtttgccagagaagagaacgaacgaaag
gacgcatcatccgcagcgagttttgcgcaaggcgacaaggacacagaggaaggggaatat
cttggtcagttaccgcctcttaccttaggacaagttcttcattgtcaccaaggtgaatta
gtcgagaagcaaactcaacctcccaaagcctttaccgatgctaccttgctgagtgcgatg
acggggattaaccgttatgtgactgacccagagatccgcaaaattttaaaggaaaccgat
ggcttaggtacggaagcgactcgcgcaggcattattgaactgctgtttaaacggggcttt
attcagcgtcagggcaagtcgattgtggccacggaggtgggcaagggcttaattaatagt
ttaccccttagcgccacgacacccgatatgacggcgctgtgggaggcaagtctaaacggt
atctgccataaagaaatctcatatcaaggctttatgcaaccactgctggggacgctaaat
aacttaattgaaaatgcgggcgctcaattaccctcagccctcaatggcttaaaagggcag
ggctttaagcgtgcagcaacgaaaaagtccggctatcgaaaagctggagccaaaggggca
ggatggaaaaaatccggcactaaaaacgcggcagtgggaagctcggccgctaaaactacc
gcggctaaatcgacggtctcgacatccggtacgcctactacgcctagacggcgagcgagc
aaagcgcccgcccaagcttga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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