KEGG T00388: Shewmr4

Shewanella sp. MR-4: Shewmr4_1635

Entry

Shewmr4_1635 CDS T00388

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

she Shewanella sp. MR-4

Pathway

she00020	Citrate cycle (TCA cycle)
she00310	Lysine degradation
she00380	Tryptophan metabolism
she01100	Metabolic pathways
she01110	Biosynthesis of secondary metabolites
she01120	Microbial metabolism in diverse environments

Module

she_M00009	Citrate cycle (TCA cycle, Krebs cycle)
she_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:she00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:she00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:she00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1936356..1939175

AA seq 939 aa
MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVSDDWRAVFDNLPPVNGASKDAPE
AAHSKVRDYFRSLAMDGRHKSAARVTDPELDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMEREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARQDRRGCKDGLQVMPIT
IHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENAIGADEVTSMINTYRDALDQGDCVVKEWRPMTLHTVDW
SPYIGREWDEAYQASMPLARLQNLADKLSYVPESHPLHSRVAKIYGDRVAMAKGEKLLDW
GFAETLAYATILEDKQRVRITGQDSGRGTFFHRHAVLHNQNDATTYLPLRNLSEDQGPID
ITDSVLSEASVLAFEYGYATAEPGGLAIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQMCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSSMEELANGTFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
KENINNIAIIRVEQLYPFPHEEMVAALADYQHVKDFVWCQEEPQNQGAWYSSQHHFWAAI
PAGAKLTYAGREASAAPACGYPELHAHQQESLVNSALKL

NT seq 2820 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagacccacagtcagtctctgacgat
tggcgtgcggtatttgataatctccctccggtgaacggtgcttctaaagacgcgcctgaa
gcggctcactccaaagtacgtgattattttcgcagtttagcgatggacggacgtcataag
agcgcagctcgtgtgaccgatcctgagttggatgctaagcaagttaaagtgctacagctg
atcaacgcccaccgtttccgtggtcaccaaggggctaacctcgacccgttagaattgtgg
aaacgtgaacctgttgccgatttagatcccgcattccacggtctgaccaaagaagacatg
gaacgtgagttcaacactggctcgttcgcccacggcggcgaaaccatgaagctggctgac
ttagtcaaagcgctaaaagccacttactgtggttcgattggcgccgaatacatgcacatt
accgataccgatgagaagcgttggatccaacaacgtctcgaaccatccttaggtaaagcc
aactacgataaaagcgttaagacccgcattctcgaaggcctaaatgctgctgaaggcatt
gaaaaatatttaggcgctaaattcccaggtgcaaaacgcttctcgttagaaggcggcgat
gcgttagtccctatgatgcgcgaaatcatttatcgcgcaggcgaagcgggcactaaagaa
atcgtagtcggtatggctcaccgtggtcgtttaaacgtactggttaacgtgttaggtaag
cgtccagcagaactgtttgacgagttcgccggtaagcacgccgatacccacggttcaggc
gacgtaaaataccaccaaggtttctcttcagatttcgaaacgccgggcggcaacgtgcac
ttagcactggcctttaacccatcacaccttgaaatcgttaaccctgtggttatgggctct
gtccgtgctcgtcaagaccgccgtggttgtaaagacggtttacaggtgatgccaattacg
attcacggtgactctgcaattgctggtcaaggtatcgtgcaagagacattcaacatgtct
caaacccgtggctttaaagtgggcggcagcatccgtattgttgtgaacaaccaagttggt
tttacaacgtcaaaccactttgatgtgcgttcaactgaatactgtactgacatcgctaag
atggttcaggcaccgattttccacgtgaactctgacgatccagaagccgttgcctttgtt
gctcagcttgctgttgattatcgtaacgagtttaaacgtgacgtggtgattgatttagtg
tgttaccgccgtcatggccacaacgaagctgatgagccaagtgcaactcagccactgatg
tatgccaagatcaagaaacaccctacgccacgtaagatctatgctgacaaactgatcgcc
gaaaacgctatcggcgctgatgaagtgaccagcatgatcaacacttaccgcgacgcctta
gatcaaggcgactgcgtagtgaaagaatggcgcccaatgacactgcacacagtggattgg
agtccgtatattggccgtgagtgggacgaagcgtatcaagcctctatgccactggcgcgc
ttacagaatctagctgacaaactgagctacgtaccagagagccacccgctgcattcacgc
gttgctaaaatttatggcgatcgcgttgccatggcaaagggcgagaagctactcgactgg
ggctttgctgaaactttagcttacgccacgattcttgaagataagcaacgtgttcgcatt
acaggtcaagactctggccgtggtactttcttccaccgtcacgcggttctgcacaaccaa
aacgatgcgacaacatacttaccactgcgtaacttgtctgaagaccaaggtccaatcgac
attactgactcagtattgtctgaagcatcagtactcgccttcgaatacggttatgcgacg
gcggaacctggtggtctggcgatttgggaagcccaattcggtgactttgctaactgtgcg
caagtggttatcgaccagttcttgtcttctggtgagcaaaagtggggccgtctgtgcggt
ctgactatgctgttaccacacggttacgaaggtcaaggtccagaacactcaagcgcccgt
ttagagcgtttcttgcagatgtgtgctaaccacaacatgcaagtttgtgtgccatcaacg
ccagcacaggtttaccatatgctgcgtcgccaagtggttcgcccaatgcgtcgtccactg
gtagtgatgtcacctaaatcattgctacgtcacccgctagcggtttctagcatggaagaa
ttggctaatggcaccttccaaaacgtgattggtgaaatcgatacgttagaagcgagcaag
gtcgatcgcgtcgtgttctgtagcggtaaggtatacttcgagctgctggaaaaacgccgt
aaagaaaacatcaataacatcgcaataatccgtgtcgaacagttatatccgttcccacat
gaagaaatggtagcagccttagctgactatcaacatgtgaaggattttgtatggtgtcag
gaagagccgcaaaaccagggtgcttggtactctagccaacatcacttctgggcagctatc
cctgcgggagcaaaactgacctacgctggtcgtgaagcatctgctgcaccagcctgtggt
tacccagagctgcatgctcaccaacaagaatctttagtgaacagtgccctaaagctgtaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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