KEGG   Shewanella sp. MR-4: Shewmr4_2469
Entry
Shewmr4_2469      CDS       T00388                                 
Name
(GenBank) DNA damage-inducible DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
she  Shewanella sp. MR-4
Brite
KEGG Orthology (KO) [BR:she00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:she03400]
    Shewmr4_2469
Enzymes [BR:she01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Shewmr4_2469
DNA repair and recombination proteins [BR:she03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Shewmr4_2469
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 DNA_pol_B_exo2 DNApolII_N
Other DBs
NCBI-ProteinID: ABI39540
Position
complement(2935779..2938211)
AA seq 810 aa
MNPPESLTPETAAPVSVQGRVLTRHAITRGATLVLQYYLATVSGPVLVELPGSEYICFCH
QSDMSALQLQTPGQALRFVPLALKSFKRQSVAAIYAQSSSVYRHLQRIATDAGIPLFEAD
IRPEQRFLIERFVALDVAFLGHFVSNAGIDEQLPIFSAVRAKAVAPQPEIKLRSISLDFE
CSFDGLLYSVALYGRDAQSQPYEKVIMVGEPQLDAAIYIEWVSDEAALIHRLIAWFTEFD
PDVIIGWSVVTFDLALLYRRALLHRIPLRIGRGGALLEWKVENKFRPETLSLPGRVVLDG
IDWLKAAFYQFERFSLEFVAQTLLGEGKAIHDVENRSQEIDALFAENKQGLAHYNLTDSR
LVWDIFEHTQLWDFALARAELTGLELGRVGASVAAFNHLYLPHLHRAGFVAPAEPASQGI
ESPGGYVMDSVPGFYQHILVFDFKSLYPSIIRTFLIDPKGLIEGLDNSEEQALDEAEIVP
GFLGARFNRQQPILPKLIQNLSEQREKAKREANAPLSQAIKIIMNSLYGVLGSQGCVFHD
AKLASSITMRGHQIMKQTRAWIEEMGYQVIYGDTDSTFVYLGPEPDLSDINALGKQIAAQ
INQQWQSKIAKDFQLESFLELQFERHYEQFFMPTLRGSEEGSKKRYVGAWRNKDGALEIT
FKGMEQVRSDWSPLARKVQAELYERMFNQRDISGYLTDVIGELQAGKRDNELVFSKRMRR
NLDEYTAKSSPHVKVARQLCELTGKASYGKRGAQIDYVITVNGPEPVSYRSSTIDYQYYV
DKQITPIAEPVFSIMKLNYTQIASKQLLLI
NT seq 2433 nt   +upstreamnt  +downstreamnt
ttgaatccccccgagagtctgacgcctgaaacggctgcgccagtgagtgtacagggacgc
gtcctcacgcgccatgctattacgcgtggtgcaacgcttgtgctgcagtattatctcgcc
accgtttcaggccctgtgctggtggagttacctggctctgagtacatttgtttttgtcat
caaagcgatatgtcggcattgcagttacaaacgccggggcaggcactgcgctttgtaccg
cttgcacttaaaagctttaaaagacaatccgtggcggcgatttatgcccagtcgagcagt
gtgtatcgtcacttacagcggatagcgacggatgctggcattcccttatttgaggcggat
atccgtcccgagcagcgttttttaatcgagcgttttgtcgcgctcgatgtggcattttta
gggcattttgtcagcaacgctggcatagatgaacaattgcccatttttagcgctgtacgc
gcgaaagccgttgcgccgcagccagaaataaaattgcgttcaatctccctcgattttgaa
tgcagttttgacggattactctattccgtggccctttatgggcgcgatgcgcaatctcag
ccctatgaaaaagtcattatggtgggtgagccgcagcttgatgctgcaatctacatcgaa
tgggtgagcgatgaagcggcgcttatccatcgtctcatcgcttggtttactgagtttgat
cccgatgtgatcattggttggtctgtggtgacctttgatttggccctattatatcggcgt
gcgttgctgcaccggatcccgctgcgtatcggccgcggtggcgcgcttctcgaatggaag
gttgaaaataaatttcggccagaaaccttaagcttgccgggaagagtggtgctcgatggt
atcgattggttaaaggcggccttttatcaattcgaacgtttctccttggagtttgttgcc
caaactttactcggtgaaggcaaagcgattcatgatgtagaaaatcgatcccaagagatt
gatgcgctatttgccgaaaataaacaagggcttgcacattataatctcaccgatagccgc
ttagtgtgggatatcttcgagcatactcaattgtgggactttgcccttgctcgcgccgag
ttaacggggttagaactcgggcgcgtaggtgcgtcagtcgcggcatttaatcatctgtat
ttaccgcatttacatagagcaggcttcgttgcgcccgcagagccggccagccaaggaatt
gaaagccctggcggttatgtgatggattctgtccctgggttctaccagcatattttagtg
tttgactttaaaagtctttatccatcaattatccggacttttttgatagatcctaaggga
ttaattgaaggcttggataacagtgaggaacaggctttggatgaggctgaaattgttcct
ggctttttaggcgctcgttttaatcggcagcaaccgatcctgccaaaacttattcagaac
ctctccgaacagcgagaaaaagccaagcgggaggcgaatgcgcctttatcgcaagcgatt
aaaatcattatgaattcgctttatggggttttaggttcccaaggctgtgtgttccatgat
gcgaaactggcaagctccatcaccatgcgtggtcatcaaatcatgaagcaaacccgagct
tggatcgaggagatgggctatcaagtgatttatggagatactgactctaccttcgtctat
ttaggcccagagccagatctcagtgatattaatgccttaggtaaacagattgctgcgcaa
atcaatcagcaatggcagagtaaaatcgcaaaggattttcagctagaaagcttcctcgaa
ttgcagtttgaacgccattacgaacagttttttatgccgaccctgcggggctcggaggag
ggcagtaagaagcgttatgttggtgcttggcgcaataaggatggtgcgctagaaatcact
tttaaggggatggagcaggttcgcagtgattggagccccttggcgcgaaaggtgcaagcc
gaactctacgaacgtatgtttaatcaacgggatataagtggctatttgacggacgtgata
ggcgaactgcaggctgggaagcgtgataatgagttagtttttagcaaacgtatgcgccgt
aatctagacgaatacactgccaagtcttctccccatgtgaaagtcgcacgtcagctttgt
gagttaacaggaaaggcatcctatggcaagagaggcgcgcagattgattatgtgatcact
gtaaacggtcctgaaccagtttcgtatagatcgtctacaattgattatcaatactacgtt
gataagcagattactcctattgcagagccagttttttcaattatgaaattaaattacaca
cagattgcctctaaacagctgttgttaatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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