KEGG T00388: Shewmr4

Shewanella sp. MR-4: Shewmr4_2936

Entry

Shewmr4_2936 CDS T00388

Definition

Beta-N-acetylhexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

she Shewanella sp. MR-4

Pathway

she00511	Other glycan degradation
she00520	Amino sugar and nucleotide sugar metabolism
she01100	Metabolic pathways
she01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:she00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:she00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C PP28

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3505848..3508538)

AA seq 896 aa
MNKTIAATAILLALGLTACSDVPKTEAVPSSSTAEQAKPNQLTQAQLQQFGDTLGVSYRV
LTNRPDDSCDKAAAEGRCFVAEIDFVPEVELKSRDWAIYFSQMRPVQAVESKEFSITHIK
GDLYRIAPTEAFNGFSKGEKKTLRFRGELWQLSETDAMPNYYIVAGDLSPVVIASTQVQQ
DPETQMEVRPYVEAYTDMVKQYRRTDADKLAPATPAQLFSNNQQVSEDASLAVNTIIPTP
QKVAIHSQDKAVSLTSGIKLDFGSVTNASAAQQSLDSKHLAAALSRLARLGVNESEQGVA
VKLNWRQGAEGSYLLDIKADAIDIAAADAAGFSYALSSLASLIDVQDLRVNAMTIEDSPR
YPFRGMHIDVARNFHSKALVFDLLDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGS
KRCHDLEENTCLLPQLGSGPFADVPVNGFYSKQDYIDIVKYADARQIQVIPSMDMPGHSR
AAIKSMEARYRKLVAEGKAEEAKTYLLSDAADTTVYSSVQYYNDNTLNVCMESTYLFVDK
VIDEIAKLHQAAGQPLTRYHIGADETAGAWKQSPACLDFVANNDKGVKSIDDLGAYFIER
ISNQLASKGIEAAGWSDGMSHVRPSNMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLS
NPEVLYFDFPYEADPKEHGYYWASRATNAHKVFSFMPDNLVANAEQWTDIQNLPFEADDR
ARTDEKGKQSGPREQGKAFAGLQGQLWSETIRSDNTVEYMIFPRLLMLAERAWHQAAWEV
PYQYQGALYNQTTGHFTAAMREAQAQSWQQMANTLGHKEFIKLDKAGIDYRVPTVGAEIR
DGKLFANVAYPGLKIEWRQASGQWQSYQAGQAVTGPVEIRAIAADGKRKGRSLVVN

NT seq 2691 nt +upstreamnt +downstreamnt
atgaataaaacgattgccgccaccgcgattttattggctctgggcttaacggcctgtagc
gatgtgcctaaaaccgaggcagtgcctagctcaagtactgctgagcaggctaagcccaac
caattaacccaagcgcaattgcagcagtttggggataccttgggcgtgagttatcgcgtg
ctcactaacaggcccgacgatagctgtgacaaagccgccgccgaaggtcgttgttttgtt
gctgaaatcgattttgtcccagaggttgagcttaagagccgtgattgggcgatttatttt
agtcaaatgcgcccagttcaagccgttgaaagcaaagagtttagtattacgcatatcaag
ggcgatctctatcgcatcgcgcccactgaggcatttaacggttttagcaagggcgagaaa
aagaccctaaggttccgcggtgagttgtggcagctctcagaaaccgatgccatgcccaac
tattacatagttgcaggcgatttatcgccagtggtgatcgccagcacgcaagtgcagcaa
gatcctgagacacagatggaagtgcgcccctatgttgaggcgtacaccgatatggtgaag
cagtatcgccgtaccgatgcggataaattagcgcctgcgacgcctgcgcagttgtttagc
aataatcaacaggtcagtgaagatgccagcttagcggtcaataccattattccgacgccg
caaaaagtcgctatccacagccaagataaagccgtgtcactgacctctggtattaaactg
gatttcggttcagtcactaacgcatcagccgcgcaacaatctttggattctaaacacttg
gcggcggcactttcccgtttagcgcgcttaggcgttaacgagtcagaacaaggtgtagcg
gtaaagctgaactggcgtcaaggcgctgagggcagctatctgctggatatcaaagcggat
gctatagatattgccgcagccgatgctgccgggttttcctatgcgttatcgtcacttgct
agtttgattgatgtgcaggatctgcgcgtaaatgccatgacgattgaggatagcccaagg
tatcccttccgtggcatgcatatcgacgtggcccgtaacttccatagcaaggcgttggtc
tttgatctgttggatcaaatggctgcatacaagctcaacaaattgcacctacatatggcc
gacgatgaaggttggcgcctagagatcgatggcctgccggaactgaccgacatcggcagt
aagcgttgccacgatcttgaggaaaatacctgtctgttaccgcagcttggcagcgggcct
tttgcggatgtgcccgtcaacggtttctatagcaaacaagactatatcgacatcgttaaa
tatgccgatgcgcgccaaattcaagtgatcccttcgatggacatgcctggccatagccgc
gcggcgataaaatcgatggaggcgcgttaccgtaagctagtggccgaaggtaaagctgag
gaagctaaaacctatctgttgtcggatgcggcggacaccacagtgtattcttcggtgcag
tattacaacgataacaccttgaacgtctgcatggagtcgacctatctgtttgtcgataaa
gtcattgatgaaattgcaaaattacaccaagcagcgggccagccattaacccgataccat
atcggtgccgacgaaacggcaggggcgtggaagcaatcgccagcttgtttggactttgtg
gccaataacgataaaggcgtgaaatccatcgacgatttaggggcgtactttattgagcgc
atttcgaatcagctcgcgagtaaaggcatcgaagcggcgggttggagcgatggcatgagc
catgttcgcccaagcaacatgcctgctaaagtccaatccaacatttgggatgtgattgcc
tataagggctatgagcatgccaatcagcaagtcaacaacggctgggatgtggtgctctca
aaccctgaggtgctttattttgatttcccctatgaagccgatcctaaggagcatggctac
tactgggcaagccgcgcaaccaacgcgcacaaagtgtttagctttatgccggacaactta
gtggcaaacgcggagcagtggaccgatattcaaaatctaccttttgaggccgacgatagg
gccagaaccgatgagaagggcaaacaatctggcccaagggaacaaggtaaagcctttgcc
ggattacaaggccagctctggagtgaaaccatccgcagtgataacaccgtggaatatatg
attttcccgcgtttattgatgctggcggagcgtgcttggcatcaagccgcgtgggaagtg
ccatatcaatatcaaggcgctttgtataatcaaactacgggacatttcaccgctgctatg
cgtgaggctcaggcgcaatcttggcagcaaatggctaacaccttaggacataaggagttt
atcaaactcgataaagcgggtatcgattaccgagtgccgaccgtcggcgccgagatccgt
gacggtaaactgtttgccaacgtcgcttatccaggactcaagattgaatggcgccaagcg
agtgggcaatggcaatcctatcaagctgggcaggcggtaacgggccctgttgagatccgc
gccatcgcggccgatggaaaacgtaaaggccgcagcttagtcgttaattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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