KEGG T00388: Shewmr4

Shewanella sp. MR-4: Shewmr4_3312

Entry

Shewmr4_3312 CDS T00388

Definition

twin-arginine translocation pathway signal

Orthology

K01113

alkaline phosphatase D [EC:3.1.3.1]

Organism

she Shewanella sp. MR-4

Pathway

she00627	Aminobenzoate degradation
she00790	Folate biosynthesis
she01100	Metabolic pathways
she01120	Microbial metabolism in diverse environments
she02020	Two-component system

Module

she_M00126

Tetrahydrofolate biosynthesis, GTP => THF

Class

Metabolism; Metabolism of cofactors and vitamins; Folate biosynthesis [PATH:she00790]
Metabolism; Xenobiotics biodegradation and metabolism; Aminobenzoate degradation [PATH:she00627]
Environmental Information Processing; Signal transduction; Two-component system [PATH:she02020]

SSDB

Motif

Pfam:

PhoD Metallophos

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3954000..3955766)

AA seq 588 aa
MKRTVTRRDFLAMSAKGIGAAVISYGLMGCSDSDDDKSVPAQFLHGVASGDPAQDAVILW
TRVTPDSAGDVKVSWQVASDAAFSQLVTTGEMVTNANRDYTVKIDARGLRAGQTYFYRFM
TGGKTSEVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVYELAAAQDDLDAVVHLGDYIY
EYARGGYASEHAAELGREVLPANELLTLSDYRTRYGQYHTDASLQKLHAKVPFITVWDDH
EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVD
LHMLDTRVLARDKQLDYADYMDASTGAFDGERFRADVTSTSRTMLGLTQLLWLQGTLLQA
TGTWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAKLAARAAANDPTLTAAELQYL
QANQALLTPEVIALLQLPSIPYNLDAWDGYAYEREVILGTAKSKNHNLVVIAGDTHNAWA
NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYTNLKDRGF
MTLTFTKEAVRSDWHYVSTILAKEFEESSSRSYSAMTKVGEPIINPVS

NT seq 1767 nt +upstreamnt +downstreamnt
atgaaacgaaccgtgactcgtcgtgattttttagccatgtcggccaaaggcattggtgca
gcagtgatctcctacggcctaatggggtgtagtgacagtgatgatgataaatctgttcct
gcgcagtttttacatggggtagccagtggtgaccctgcgcaagacgcggtgatcctctgg
acccgcgtgacgcctgattctgctggggatgttaaagtcagctggcaagtggccagtgat
gcggcattctcacaattagtgaccacaggggagatggtcaccaacgctaaccgtgattac
acggtcaaaatcgatgcccgtggtttacgtgcgggacaaacctacttctaccgctttatg
acgggcggaaaaacctctgaggtgggcaagacccgcactctgcccgagggtgatgtgagt
tcggtaaaacttgccgtcatgtcctgcgctaattttccagccggctattttaacgtgtat
gaattggctgcggcgcaggatgacctcgatgccgtggtgcatttgggtgactatatctac
gaatatgctcgcggcggctatgccagcgaacatgcggcagagcttggccgtgaagtgtta
cccgccaacgaactgctgaccctcagcgattaccgtacccgttacggccaatatcatacc
gatgccagcctgcaaaaattgcacgcgaaagtgccatttattacggtatgggacgaccac
gaagtagcaaacgatacttggcgtgatggcgccgagaaccacaacgaaggcgaaggggat
tttgcggttcgtaaagaagccgcactgcaggcttacttcgagtggctgccaatccgtcca
tggcgcgagggtaaccatgaggagatttatcgcagcttcagttacggcaacttagttgac
ttacatatgctggatacgcgcgttttggcccgtgataagcagctcgattatgccgattat
atggatgccagtacgggcgccttcgatggcgagcgtttccgcgccgatgtgacatcgact
tcgcgcactatgttaggtctgacccagttactctggttacagggcaccttattgcaagcc
acgggcacttggcaggtattaggacaacagatcctcatgggcaaaatgtctctacctgcg
gcgattgctacccagcagatgagcattccacaatatgccatgcttggggcgctggcgaag
ttagccgcccgcgctgcggcaaatgacccaaccctaacggcggcggaattacagtacttg
caggccaatcaagccctgttaacgccagaagtgattgccctgctgcaactgccatcaatt
ccctataacttggatgcatgggatggttatgcctatgaaagggaagtgattttaggtaca
gctaaatcgaaaaatcacaacctagtggtgattgccggtgacacccataatgcctgggcg
aatgagcttaaagatgtcaacggcgataccgtaggggtcgagtttgccacaagctcagtg
tcatcaccaggtttggaatattacttaaatctaccagcagaacagatccccgcgaccgag
gcggcgatcgtcgagttggtgccagatcttaaatacaccaacctcaaagatcgcggcttt
atgactttaaccttcaccaaggaagcggtgcgtagcgactggcattatgtcagcacgatt
ctcgcgaaggagtttgaagagtcgagtagccgcagctacagcgccatgactaaggtcggt
gaacctattatcaaccctgtgagctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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