KEGG   Shewanella sp. FDAARGOS_354: CEQ32_03975
Entry
CEQ32_03975       CDS       T04944                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf03030  DNA replication
shf03430  Mismatch repair
shf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CEQ32_03975
   03430 Mismatch repair
    CEQ32_03975
   03440 Homologous recombination
    CEQ32_03975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shf03032]
    CEQ32_03975
   03400 DNA repair and recombination proteins [BR:shf03400]
    CEQ32_03975
Enzymes [BR:shf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CEQ32_03975
DNA replication proteins [BR:shf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CEQ32_03975
DNA repair and recombination proteins [BR:shf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CEQ32_03975
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ASF14271
Position
868386..869114
AA seq 242 aa
MNIISNASRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQA
IDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPL
GPKTRDICDILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLS
MTGGQTKFNLSNEEVGQEAGGIQRFDPASLNLKVISASADELVIHEQRLDLVAKSGKCLW
RG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaatattatctcaaacgcaagccgtcaggttattttggatactgaaaccactggtatg
aaccaggggagtggtgcggtgtatttaggacaccgaattattgagataggctgtgttgag
gtcatcaaccgccgtttaacggggcgttattaccatcaatatatcaatcctggccaagcg
attgatccagaagcgattgctgttcacgggatcaccgatgagcgtgttgcaaatgagcca
aggtttcatcaaatagcgcaagagtttatcgattttatcagtggcgcagaaattgtagcc
cataacgcaaacttcgacgtgagctttatggaccatgagttttccttactgcaaccgtta
ggaccaaagactcgcgacatttgtgatattttagactccctcgatatcgctaagtttttg
catcctgggcaaaaaaacaacttagacgctctctgcaaacgttatggcatcgacaattcc
cgccgtcattaccacggcgcattactcgacgccgaaattcttgccgatgtgtatttgtcg
atgacgggaggtcagactaagttcaatctctctaacgaagaagttggtcaagaggcggga
ggcattcaacgctttgatcccgcatcacttaatcttaaagtgatcagcgcatcggccgat
gaactcgttatacatgaacaacgccttgatttagtcgcaaaatcaggaaagtgcctctgg
agaggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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