KEGG   Shewanella sp. FDAARGOS_354: CEQ32_05075
Entry
CEQ32_05075       CDS       T04944                                 
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf00730  Thiamine metabolism
shf01100  Metabolic pathways
shf01240  Biosynthesis of cofactors
Module
shf_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:shf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    CEQ32_05075
Enzymes [BR:shf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     CEQ32_05075
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: ASF14457
Position
complement(1109318..1111480)
AA seq 720 aa
MSSLESSSESLAVNTHGQTNRRVARAEAQAFIDTLKPLQHPNSQKLYLQGSREDLRVGMR
QILQTDTRIGGTVIAPKVEKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDT
EVLDCATSDFTQQRLKDDGLDHLRFEAGSSAIVRPRRALPGKRVSQLHYARQGIITPEME
YVAIRENMALAQVQDEILNRRGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEA
EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM
TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD
ANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG
PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA
ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSM
CGPKFCSMKITQDVRDYAASLAAGTLSVASSSQNVVSAEALASINPAQQGQSNTEAIQQI
RVKTQDELAVAMAQKSAEFAASGAKLYLPLGDANTAKTANEAAKHQDGAELKPTAQVAEV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgtccagtttagaatcgtcctcagaatcacttgccgtgaacactcatgggcaaacgaac
cgccgtgtggcgcgcgccgaggcgcaagcctttatcgatacccttaaaccattacaacat
cctaattcgcaaaagttgtatttgcagggaagccgtgaggatctccgtgtagggatgcgg
caaattctgcaaaccgatacgcggattggcggcacggtgatcgcgcccaaagtcgagaaa
aatcctcccattccggtgtatgactgtgccggtccttattccgatcctgctgcgcaaatt
aacgtgcgccaaggtttagccaaactcagattaccgtggattatcgagcgccaagatacc
gaagtgctcgattgtgcaacctcagattttacccagcaacgcctaaaggatgatgggctc
gatcatctgcgtttcgaagccggctcaagtgcgattgttcgtcctcgccgcgccttaccg
ggtaaacgcgtgagccaattacactatgcgcgccaagggatcattacccctgaaatggaa
tatgtggcgattcgggaaaatatggcgctcgcccaggtgcaagatgaaatcttaaaccgc
cgcggccaaggtgaatcctttggcgccgtaataggtaaaccgataacccctgaatttgtc
cgcgatgaaattgcccgtggacgcgccattattccgttaaatatcaatcaccccgaagct
gagcctatgattattggccgtaactttttagtcaaagtgaacgccaatatcggtaactcg
gcggtcacgtcttccatcgaggaggaagtggaaaagctagtctggtcaacccgttggggc
gctgacactgtgatggacttgtccactggccggtatatccatgaaacccgagaatggatt
atccgcaactcgccagtgcctattggcacagtgccgatttatcaagcattggagaaagtg
aatggtgttgctgagcacctgacctgggaagtgtttcgcgatactttgattgagcaagcg
gagcagggcgtcgattactttaccatccacgcgggcgtgttattgcgctatgtgccgatg
accgccaaacgggtgactgggatcgtgtcccgcggcggctctattatggccaaatggtgc
ttgagccaccatcaagaaaacttcctctatacccatttccgtgagatttgcgagctgtgc
gttgcctacgatgtgtcgctgtcattaggcgatggtatgcgacctggctccattgccgat
gccaatgatgaggcgcagttcgccgagcttgagaccttaggcgagttggtcaaaatcgct
tgggaatacgatgtgcagaccattatcgaagggcctggacatatcccgatgcaacttatc
aaagagaatatggataagcagcttatccactgcgccgaggcgccgttttatactctaggg
ccgcaaattaccgatattgcgccgggttacgatcatttcacctcggggataggtgcggcg
atgatcgcatggtatggctgcgccatgctctgctatgtgacgccgaaagagcacttaggt
ttgcccaataagcaggacgtcaaacaagggctgattgcctacaagattgccgcccatgca
gccgatattgccaaaggccacccgggcgcgcagatccgcgacaatgcgttatctaaggcg
cgttttgaattccgttgggaagaccaatataacctgggacttgaccctgataccgcccga
gcctatcacgatgaatccctgccacaagagtcggccaaggtcgcgcatttttgctctatg
tgtggccctaagttctgctcaatgaagatcacccaagatgtgcgcgactatgcggcaagt
ttagcggcgggtacgttgtcagtggcttcgtcaagccaaaatgttgtgagcgctgaagcg
cttgcatcgataaaccctgctcaacaagggcaatcaaacacagaagcaatccagcagatc
agagtcaaaactcaagatgaattagcggtggccatggcgcaaaaatcggctgagtttgcg
gcctcgggcgccaaactgtatctgccgctgggcgatgctaatacagctaaaactgccaat
gaagcggcaaagcatcaggatggggcagagctcaaaccaacagcacaggttgcggaggtt
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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