KEGG T04944: CEQ32

Shewanella sp. FDAARGOS_354: CEQ32_11575

Entry

CEQ32_11575       CDS       T04944

Symbol

rumB

Name

(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

shf Shewanella sp. FDAARGOS_354

Brite

KEGG Orthology (KO) [BR:shf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shf03009]
    CEQ32_11575 (rumB)
Enzymes [BR:shf01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     CEQ32_11575 (rumB)
Ribosome biogenesis [BR:shf03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CEQ32_11575 (rumB)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Cons_hypoth95 Methyltransf_25 Methyltransf_12 UPF0020

Other DBs

NCBI-ProteinID:

ASF15548

Position

complement(2562384..2563538)

AA seq 384 aa
MSTLVQCGYFEQGQCQSCRHIKLPMSMQLAAKTQELQQLLAPFVEHTNTQFLPPVVGENQ
GFRNKAKMVVLGAAHAPVLGIVSPSGEAVSLCDCLLYPADMQALLHRLERFVQQAGIPPY
RIDKAKGELKFILLTRSQVRGEYMLRFVLRSSDAIARIERELPALLAEYPQISVVSVNIQ
PIHMAILEGDEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVGEFA
PKSLWDLFCGVGGFGLHCASKDIPLTGIEIEAEAIACAKMSAQMMGLDNVQFMALDSTDF
AKGDAAQTKPDLIIVNPPRRGIGESLCHALSEFAPRAILYSSCNPKTLAKDLAHIRGYRL
TKVQLFDLFPHSDHFEVLAMLVKD

NT seq 1155 nt +upstreamnt +downstreamnt
gtgagtacattagtgcaatgtgggtattttgaacaaggccaatgccaatcctgtcgtcat
attaagctccctatgtcgatgcaattagcggcgaaaacccaagaattacagcaattgtta
gccccatttgttgagcatactaatacccaatttttgccgcccgtagtgggtgagaaccaa
ggttttcgtaacaaggcgaaaatggtggtgctgggcgcggctcatgcgcctgtactgggg
attgtcagtccaagcggtgaggcggtgagtctctgtgactgcttgctgtatcctgctgat
atgcaagcgttgctccaccgtctggagcgttttgtgcagcaagcgggtatcccgccgtat
cgtatcgataaagccaagggcgagcttaagtttattctactgacgcgcagccaagtgcgc
ggcgaatatatgctgcgttttgtgctgcgctcatccgatgccattgcccgtattgaacgg
gaattacccgcgttgctggctgaatatccacaaatcagcgtcgtatcggtaaatattcag
cccattcatatggcgatccttgaaggggatgaggaaattttcttaactgaaaatactcgt
cttgaagagcgctttaacgatgtgcctttgtttattcgcccaaaaagcttttttcaaacg
aatccacaggttgctgcaaagctgtatcaaaccgcccgtgagtgggttggtgaatttgca
ccaaagtccctgtgggatttattttgtggtgtgggcggttttggcttgcactgcgcctcc
aaagatatccctttaactgggattgaaatcgaagccgaggcgattgcgtgcgctaagatg
tcggcgcaaatgatggggctggataacgtgcagtttatggccctcgactctaccgatttt
gccaagggtgatgcggcgcaaacaaagcccgatttgattattgtcaatccgccgcgtcgt
gggattggtgagtccctgtgtcacgccttaagtgaatttgcccctagggcgattttgtat
tccagttgtaatcccaaaacccttgctaaagatctcgcccatattcgtggctatcgatta
actaaggtgcagttgttcgatctctttccccattcggatcatttcgaagtcttagccatg
ttggtaaaagattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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