KEGG   Shewanella sp. FDAARGOS_354: CEQ32_18450
Entry
CEQ32_18450       CDS       T04944                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf00300  Lysine biosynthesis
shf00470  D-Amino acid metabolism
shf01100  Metabolic pathways
shf01110  Biosynthesis of secondary metabolites
shf01120  Microbial metabolism in diverse environments
shf01230  Biosynthesis of amino acids
Module
shf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:shf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CEQ32_18450 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CEQ32_18450 (lysA)
Enzymes [BR:shf01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CEQ32_18450 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: ASF16784
Position
4097346..4098590
AA seq 414 aa
MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHIVCYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV
VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQRIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLKRLGHRKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVNPRDEDTQVFDIVGPVCETGDFLGKDRQLAIAAGD
LLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQLLP
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttggatcactttctctaccaagataataccctgtacgcagaaggctgtcgggtcaatgat
ttagcccagcagtatggcacgccactgtatatctattcccgtgcgacgctcgaacgtcac
tggcatgcctttaataatgcagttgccgaccatccacatatagtgtgttacgcggtgaaa
gccaactcgaacttagccgtactgaacgtattggctcgtttaggtagtggttttgatatt
gtctcgggcggcgagttagcgcgggtgattgaagccggtggtgaccctgccaaagtggtg
ttttcgggcgtgggtaaaaccgttgccgaaatggagcaggcattaaatcttggtatctac
tgctttaacgttgaatcgagtgctgagcttgaacaacttaacgatgttgccggccgctta
ggtaaagttgctccagtgtcactgcgggtgaatcccgatgtcgatgccggtacgcatcct
tatatttcgacgggtcttaaagaaaataaattcggtatcgccatggatgaggccgaagtt
gtatttgctcgcgcccatgcgctgccgcatttgcaggtaaaaggggttgattgccatatc
ggctcacagctcactgaaattcagccgtttctcgatgcaatggacagaatgctatcgctc
attgaccgcctagccgagcaaaggatagtgattgagcactttgatgtcggtggcggttta
ggggtgacctatgatgatgaaacgccaccgcatcctgatgtgtacgccgctgcactgcta
aagcgtttaggtcatcgcaagctcaaactgattttcgaaccgggccgtgcgattgctgcc
aatgcggggatttttgtgactgaggtgctgtacctcaaagaaaacagtgacaaacgtttt
gcgattgttgatggtgccatgaacgacttaattcggcctgcactctatagtgcatggcaa
aatatcattccggtgaatccacgggatgaagatacgcaagtatttgatattgtaggacct
gtgtgcgaaaccggtgactttttaggtaaggacagacaactcgcgattgcggcgggggat
ttactggttgtgcgctccagtggtgcttacggttttgccatggcgtcgaactataatact
cgtccgcgtgcggccgaggtcatggtggatggcgataaggcttatctggtgcgagagcga
gaaaaattagcgcagctctggcaaggtgagcagctcctgccgtaa

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