KEGG   Sphingobacterium sp. 21: Sph21_3236Help
Entry
Sph21_3236        CDS       T01450                                 

Definition
DNA-formamidopyrimidine glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
shg  Sphingobacterium sp. 21
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:shg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Sph21_3236
Enzymes [BR:shg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Sph21_3236
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Sph21_3236
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4005738..4006514
Genome map
AA seq 258 aa AA seqDB search
MPELPDLEVFSRNLTRILKGKKLERIHVHEHKKVSVPEKELKEALKKRELKKVYRLGKQL
YFDFGKNALLSLHLMLHGKLVYTNEENPKYALLSLKFEKAQTLFITDFQKMAHIQLNPKR
TASVDALSDDLHAERLYMILQNSKATIKTLLMDQHIIGGIGNAYADEILWEAKIAPQSIA
NKIPKEKVSELVESIKEVLLQAEKMILKEHPDIISGEIRDFMKVHRVKAKEDPQGNPIRT
EKIGGRTTYFTDRQHVYA
NT seq 777 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattacccgatttagaggtttttagtagaaaccttacgagaatccttaagggg
aaaaaactggaacggatacatgttcatgagcataaaaaagtcagtgttccggaaaaagag
ctcaaagaagctttgaaaaaacgtgaattaaagaaagtatatcgcttgggaaagcaactt
tatttcgatttcggaaaaaatgcattattatctcttcatttaatgcttcacggtaaactg
gtatataccaacgaagaaaaccctaagtatgccctattatccttgaaattcgaaaaggct
caaacgctcttcataacagactttcaaaagatggcccatattcagctaaatccgaagcgg
acagcgtcggtagatgctttgtcggatgatctgcatgctgaacgactgtatatgatcctt
caaaacagcaaggcaactataaaaacacttctaatggatcaacatataatcggtggtatt
ggaaatgcctatgcggatgaaattctttgggaggcaaagattgcaccgcaatctatcgcc
aataaaataccaaaagaaaaagtaagcgaattagtggaaagtattaaagaagttttattg
caggcggaaaaaatgatattaaaagaacaccccgatatcataagcggtgaaattcgcgat
tttatgaaggttcatcgtgtgaaggccaaagaagatccacaaggtaatccgatccgaacg
gaaaagataggtggcagaactacttatttcacagatcgccaacatgtctacgcttaa

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