KEGG   Shewanella halifaxensis: Shal_0016Help
Entry
Shal_0016         CDS       T00654                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
shl  Shewanella halifaxensis
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:shl00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Shal_0016 (fadB)
   01212 Fatty acid metabolism
    Shal_0016 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Shal_0016 (fadB)
   00650 Butanoate metabolism
    Shal_0016 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Shal_0016 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Shal_0016 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Shal_0016 (fadB)
   00310 Lysine degradation
    Shal_0016 (fadB)
   00380 Tryptophan metabolism
    Shal_0016 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Shal_0016 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Shal_0016 (fadB)
   00281 Geraniol degradation
    Shal_0016 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Shal_0016 (fadB)
Enzymes [BR:shl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Shal_0016 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Shal_0016 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Shal_0016 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Shal_0016 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(18833..20986)
Genome map
AA seq 717 aa AA seqDB search
MIYQSPTIEVELLEDNIAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDTSIKALMLSSA
KDAFIVGADITEFLGLFAEEDAVLQSWLEQANVVFNKLEDLPFPTLSAINGFALGAGCET
ILATDFRIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPDAALK
VGAIDAVVAPEQLRPAALRMLKDAMAEKLDWQTRRAKKLAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMAVISVIEQAAQCGRAEALQIEHQAFIKLAKTEVAQALIGIFLNDQLVK
GKAKKAGKLAKKVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
TAQVKRGRSTPAKMATVLNNITPALDYAPVKDTDIIVEAVVEHPKVKSMVLAEVEEHVSE
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSDETVASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMFEAERFGQKNNKGFYQYSVDHRGKP
KKDLDPTSYELLQAEFGEQKAFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYLDTIGVANFVALADKYAHLGGLYQVTDTMRELAANNGSYYQQA
NT seq 2154 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagccctacaattgaggttgagttactcgaagacaacatcgcgcatttg
tgcttcaaggcacaaggttcggttaataagttcgacagggaaaccatcgactcgttaaat
gctgcactcgacagcatcaaacaagacactagcatcaaggctctaatgctaagttcagcg
aaagacgctttcatcgttggtgccgatatcacagaattcctaggattgttcgccgaagag
gatgcagtcttacagtcttggctagagcaagccaacgttgtattcaacaaattagaagat
ctgcccttcccaactctttctgcaattaatggctttgcgctgggtgccggttgcgaaacc
attctagctaccgacttccgtatagcagacaccacagcccgtattggcctaccagaaact
aagctaggtattatcccgggctttggtggtaccgtgcgcctacctcgtgtaattggtgcc
gacaacgcacttgagtggatcacatcaggcaaagaccagcgtccagacgccgcacttaaa
gttggtgccatcgatgcagttgttgctccagagcaacttagacccgcggcattaagaatg
ctcaaagacgccatggcagaaaaacttgattggcagacccgccgcgctaagaagctggca
ccgcttacgctaccaaaactcgaagccatgatgtctttcgcaaccgcaaaaggtatggtc
tttaagattgcaggtaaacactacccagcaccaatggctgtgattagcgttatcgagcaa
gccgcgcagtgcggccgcgctgaagcactacaaatagaacatcaagcatttataaagctt
gccaagacagaagtcgcacaggcactgattggtatcttccttaatgaccagctcgtaaaa
ggcaaagccaagaaagcaggcaagctggctaagaaggtaaactcggcagcggtactcggc
gccggcatcatgggcggcggtatcgcatatcaaagtgccagcaagggcacgccgattgtg
atgaaagatattgcccaacccgcactcgatttaggtttaggtgaagccgctaagctatta
actgcacaagttaaacgcggacgctcaacaccagccaagatggctacggtgctgaataac
atcactccagcactcgattacgctccagtaaaagatactgatatcatcgttgaagcggtt
gtcgagcatccaaaagtaaaatctatggtgctggcagaggttgaagagcatgtcagtgaa
gatgccattatcacttcaaacacatcgactatatcaattaacctactagccaagagcctt
aaaaagcctgagcgcttctgtggtatgcacttcttcaacccggtacacaagatgccgcta
gtcgaagtcattcgtggtgaaaacagctctgacgaaacggttgcctcagtagtggcttac
gccagcaaaatgggcaagacgcctatagtggttaatgactgcccaggcttctttgtaaac
cgagtactcttcccgtactttgccggctttagtggcctacttgccgatggtgctgatttt
gccgctatcgataaagtgatggagaagcaatttggttggccaatgggccctgcttacctt
cttgatgttgtaggcctagatactggtcatcatgcacaagcagttatggctgaaggcttc
cctgaccgcatgggtaagtcaggtaaagatgctatcgatgttatgttcgaagccgagcgc
ttcggccagaaaaacaataaaggtttctatcagtattcggttgaccatcgcggcaagcca
aagaaagatttagatccaaccagctatgaattactgcaagctgagtttggtgagcaaaaa
gcatttgaatcagatgagatcatcgctcgcactatgatccctatgattatcgagacagtt
cgctgccttgaagaaggaattatcgcttcgcctgctgaagcggatatgggcttagtttac
ggccttggcttcccaccatttagaggcggtgtattccgttacctagataccataggtgtc
gctaactttgttgcactagcagacaaatacgcacacttaggtggtctataccaagtaacc
gacactatgcgtgaacttgccgccaacaatggcagctactaccagcaggcttaa

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