KEGG   Shewanella halifaxensis: Shal_0063
Entry
Shal_0063         CDS       T00654                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
shl  Shewanella halifaxensis
Pathway
shl00061  Fatty acid biosynthesis
shl00071  Fatty acid degradation
shl01100  Metabolic pathways
shl01212  Fatty acid metabolism
shl02024  Quorum sensing
Module
shl_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:shl00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Shal_0063
   00071 Fatty acid degradation
    Shal_0063
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shal_0063
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:shl01004]
    Shal_0063
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shl04147]
    Shal_0063
Enzymes [BR:shl01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Shal_0063
Lipid biosynthesis proteins [BR:shl01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Shal_0063
Exosome [BR:shl04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Shal_0063
  Exosomal proteins of breast cancer cells
   Shal_0063
SSDB
Motif
Pfam: AMP-binding
Other DBs
NCBI-ProteinID: ABZ74639
UniProt: B0TM46
Position
72038..73834
AA seq 598 aa
MSLEQYHVVRLIQQQSQALGDAIALEGFETAAPWHQVSWAQFDTITSKIARVLIQFGIES
HDRAVILSQNCPQWTCADFGLLKAKAVVVPIYPTSTIEQATYIVNDAEAKLVFVDDKDQY
AMACDLVAQCDSLTRVVVFDKSVELQDQQNHFYLDDLLEREVDLVAAAELEKRLADLSLD
DLLTLIYTSGTTGDPKGVMLDYRNFASMVRQHDTLLPFTPGDVSLAFLPLSHVFERGWSF
YVLCRGGHNVYLSNPMAVKEAIVQVRPHTLCVVPRFLEKVYSAVQDKVIKAPEMRQKMFT
WAMSVGHKQSEVGQGRHKASLGLSLQWKLADKLVFSKLKQVLGGRLKFMPCGGAALDPNV
SAFFQSIDVPVLCGYGMTETTATATCNTLSNRVPGSNGKAIPEVEIKLGKDNEILVRGDT
VMRGYFNRPQETADAFEDGWLKTGDAGRLDENGNLFITDRIKELMKTSNGKYIAPQRVEG
KVGCCPFIEQVAIVADARNYVTALIVPAFESLEAWAKEKGVHYETQLDLLRNIRVVELFE
QRLKTLQSELAGFEKIKKFTLLPDAFSMEAGLITPTMKLRRKVIYNKYAREIDKMYSR
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcgctcgagcaatatcacgtagtacgattaatacagcaacaaagccaagcacttggc
gacgctattgcgctcgaaggattcgaaacagcagcgccatggcatcaagtgagctgggct
caatttgataccatcacctctaaaattgcacgggtgttgattcagtttggtattgaatcc
catgaccgcgcagtgattttgtcacagaactgtccacagtggacttgtgctgattttggc
ctactaaaggctaaagccgttgttgtacctatctatccaactagcacaattgaacaagct
acttacatagttaacgatgccgaagcgaaacttgtcttcgtcgatgataaagatcagtac
gcgatggcgtgtgatctcgttgctcagtgtgacagcttgactcgagttgtggtattcgac
aaatctgttgagctacaagatcagcaaaatcatttttacttagacgacctactcgaacgt
gaggttgacttagtcgcagcagcagagcttgaaaagcgcttagcggacttaagtttagat
gacttattaacgctgatttatacttcaggtacaactggtgaccctaaaggggtgatgctc
gattaccgtaattttgcttctatggtacgtcagcatgacacactcttgccatttacaccg
ggtgatgtgtcattggcattcttgccactgagtcacgtgtttgaacgcggttggagcttc
tacgtcctatgtcgtggcggccataacgtctacctgtctaaccctatggctgtgaaagag
gcaattgtacaagttcgcccgcacactctttgtgtcgtgccacgcttcttagaaaaagtg
tatagcgcggtacaagacaaggtcattaaagcgccagagatgagacagaagatgttcact
tgggcgatgtctgtgggtcataagcagtctgaagtgggccaaggccgacacaaggcttcg
ttgggcttaagtctgcagtggaaactggccgataagctggttttcagcaagttaaagcag
gtcttaggtggacgccttaagtttatgccttgcggcggtgcggcactcgatccaaatgtc
agtgctttcttccaaagcatcgacgtgccagtactgtgtggctatggcatgacagaaacc
acggcgacagcaacctgcaataccttaagtaatcgcgtgccaggttctaacggtaaggcg
atacctgaagttgagatcaagctaggtaaagacaacgaaattctggttcgtggtgatacc
gtaatgcgcggttacttcaatcgtccacaagaaaccgctgatgcgtttgaagatggttgg
ttgaaaacgggtgatgcgggtcgtctggatgaaaatggcaacctgtttatcaccgaccgc
attaaagagttgatgaagacctcaaacggtaagtatatcgctccgcaacgtgtagaaggt
aaagtggggtgttgcccattcatcgagcaagttgcgattgttgccgatgcgcgtaactat
gtgaccgccttgattgtgccagcctttgagtcgttagaagcttgggcgaaagagaagggc
gttcattacgaaacccagcttgatctactacgcaatattcgtgtggttgagctttttgag
cagcgtcttaaaactttgcaaagcgagctcgctggctttgagaagattaagaagtttacc
ttgttgccagatgctttctcgatggaagcgggtttaattaccccgaccatgaagctacgt
cgtaaggtgatttacaacaagtatgctcgtgaaatcgacaagatgtacagccgctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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