KEGG   Shewanella halifaxensis: Shal_0954Help
Entry
Shal_0954         CDS       T00654                                 

Definition
DNA polymerase III chi subunit HolC
Orthology
K02339  
DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
shl  Shewanella halifaxensis
Pathway
Purine metabolism
Pyrimidine metabolism
Metabolic pathways
DNA replication
Mismatch repair
Homologous recombination
Module
DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:shl00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    Shal_0954
   00240 Pyrimidine metabolism
    Shal_0954
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Shal_0954
   03430 Mismatch repair
    Shal_0954
   03440 Homologous recombination
    Shal_0954
Enzymes [BR:shl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Shal_0954
DNA replication proteins [BR:shl03032]
 Prokaryotic Type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Shal_0954
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1175949..1176452)
Genome map
AA seq 167 aa AA seqDB search
MFTSQSSSQSQAQFYLMPKDVNRASNAPKTALEQVYLLACQLAERAFTAHELVYIHCQDQ
QQAYAVDELLWQFEPQSFVPHNLKGEGPLGGAPVEIGFDRLGANKKRHLLINLADQVPQF
AVNFGQIIDFVANDDSHKAIARDRYRQYRALGIALSTQDIATQPINF
NT seq 504 nt NT seq  +upstreamnt  +downstreamnt
atgtttacgagccaatcgtcaagccagtcgcaagcccagttttatctgatgccaaaggac
gttaatcgagcatccaatgcgcctaaaacagcgttagagcaagtgtacctgcttgcctgc
caattggccgagcgagcgtttaccgcacatgagctcgtttatattcattgccaagatcaa
cagcaagcttatgccgttgatgagcttctctggcaatttgaaccgcaatcatttgtgccc
cacaaccttaaaggtgaaggcccattaggcggtgcaccggtagaaattggctttgataga
cttggcgccaacaaaaaacgtcatcttcttattaatcttgcagaccaagtgccgcaattt
gcggtaaactttggacagattatcgatttcgttgccaacgacgatagccataaagcgatt
gctcgcgatcgctatcggcagtatcgcgcacttggaattgcattaagcacccaagatata
gcaacacaacctattaatttttag

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