KEGG T00654: Shal

Shewanella halifaxensis: Shal_1148

Entry

Shal_1148 CDS T00654

Definition

beta-N-acetylhexosaminidase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

shl Shewanella halifaxensis

Pathway

shl00511	Other glycan degradation
shl00520	Amino sugar and nucleotide sugar metabolism
shl01100	Metabolic pathways
shl01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:shl00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:shl00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C DUF778

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1394433..1397138

AA seq 901 aa
MKIKVIVSAVALALSVGACSKQNESEETASVISPTEQSTLVSQPVNGSDFTQASLNQIGE
TLDISYRVVTNVPDGHCDQNTVDGRCFLAEIDLTSQVDIDNKDWAIYYSQMRPIQSIVGD
EFTITRIQGDLHKIAPAAGFSGIKKGQTKTIQFRGELWQLSETDAMPNYYIVADDLEPVI
IGSTQVAVDSETGMEVRPYVSAFTDSDTQYKRRETDKLEWATTEVLYRNNLNTPVDASLA
ENTILPTPSKVSLKIDAKPVSLKDGLKLELNDVSLEAVDAALQRLARIGVGQSDAEIGRG
ISTALLPLTAPSAKGEYRLDISSNGIKVFAADDAGFSYGLASLAALVDVDTLTVNPLLVE
DAPRYDFRGMHIDVSRNFHSKQLVLDLLDQMAAYKLNKLHLHMADDEGWRLEIADLPELT
EVGSKRCHDLNEDTCLLPQLGSGPFSNTKVNGYYSKADYIEILQYAAARQIQVIPSMDMP
GHSRAAIKSMEARYRKLMAQDKAAEANEYLLSDSQDKTVYSSIQYYNDNTLNVCMESTFT
FIDKVIDEIAKMHQQAGVPLNLYHIGADETAGAWLESPVCKAFIANNDKGVTNMQDLGAY
FIERTSKLLAAKGIEAAGWSDGMSHTRPENMPKQVQSNIWDVVAHGGHKRAHTQANLNWQ
AVLGQPEVLYFDFPYEADPKEHGYYWASRNTNSQKIHSFMAGNLPANAEQWTDIEALPFE
ADDMLKKDEAGKIISGPLKASIRFAGIQGQLWSETVRSDDVAEYMMFPRLMMLAERAWHK
PEWEVPYQYQGAVYNQQSGYFTKEMRQAQAKDWHRVANTLGAKELLKLDKAGIAYRVPTP
GAVINDGKLFANVIFPGLSIEYRDAKGQWQAYSDGVTVTAPVEVRVIAADGKRKGRILVV
N

NT seq 2706 nt +upstreamnt +downstreamnt
atgaagattaaagtgatagtttcagcggtagcactcgcgttgtctgttggtgcttgttct
aagcagaatgaatctgaagagactgctagcgttatctcccccactgagcaaagcacactt
gttagtcagcctgtaaacggctctgactttactcaagcttcattgaaccaaattggcgag
acgctcgatattagctatcgcgtggtgactaacgttcccgatggccattgtgaccaaaat
acggtagatggccgctgtttcttggctgaaatagacctgacttctcaagtcgatatagac
aataaagattgggctatctactactcgcaaatgcgcccaattcaaagcatcgtgggtgat
gagttcactatcactcgtattcaaggcgatctacacaaaatagctccggcagcgggcttt
agtggtattaaaaagggccaaactaaaacgattcaatttcgcggtgagctgtggcagtta
tctgaaacagatgccatgcctaactactatatcgttgccgatgatctagaacccgtcatc
attggcagtactcaggtagcagttgactcggaaactggcatggaagtacgcccctatgtc
agtgcttttaccgacagcgatacccaatataaacgccgtgaaaccgataagcttgagtgg
gcaactactgaggtattatatcgtaataatctcaacacgcctgtagatgccagcttagca
gagaatacgattttaccaacaccatcaaaggtttcattgaaaatagatgcgaaacctgta
tcactaaaagatgggctaaagcttgagcttaatgatgtcagtctagaggccgttgatgcc
gcgctgcagcgtttagcacgtattggtgttgggcaaagtgatgctgagattggtcgtgga
attagcactgcactattacccttaaccgctcctagcgcaaagggcgagtatcgtcttgat
atctcaagcaatgggattaaagtttttgccgcagatgatgcgggcttctcctatggttta
gcctcactggcagcattggttgatgttgatacattaaccgttaatccgctgctggtggaa
gatgcgccgcgctatgattttcgaggaatgcatatcgatgtatcgcgcaacttccatagc
aagcagctagttttagatctattagatcagatggcggcctataagctcaataagttacat
ctgcatatggcggatgatgaaggttggcgtttagagatagcagacttacctgagctaaca
gaagtcggtagcaagcgctgtcatgatcttaatgaagatacctgtctactacctcagtta
ggaagtggtccctttagcaatactaaggtcaatggttactatagcaaagccgattatatc
gagatcttacagtatgcggcagcgagacaaatacaggtgatcccatcgatggatatgccg
gggcattcccgcgcggcaatcaagtcgatggaagcgaggtatcgtaagctaatggcgcag
gataaagctgcagaagcaaatgaatacctgttatcagatagccaagataaaacggtttat
tcatcgattcagtactataacgataacaccttgaatgtgtgtatggagtcgacctttacc
tttatcgataaggttatcgatgaaattgctaagatgcaccaacaagcgggtgtgccgctt
aatctttatcatatcggcgccgatgaaaccgctggggcttggttagagtcgcctgtatgt
aaggcctttatcgccaataacgataaaggcgtgacaaatatgcaagatcttggcgcctac
tttatcgagagaacgtctaagttattagcggccaaaggtattgaagcggcagggtggagc
gatggcatgagccatactcgccctgaaaatatgcccaagcaggtgcaatcaaatatttgg
gacgtggttgctcatggtggacataaacgcgcccatactcaggctaatcttaattggcaa
gcggtattaggccagcctgaagtcctctattttgactttccctatgaggccgatccaaaa
gagcacggctattactgggcgagccgtaataccaattcgcaaaaaatccacagctttatg
gcgggtaacttaccagcaaacgccgagcaatggactgatatcgaagcgctgccgtttgaa
gccgacgatatgctaaaaaaagatgaagcgggtaaaatcattagtgggccactaaaagca
tcgattcgttttgcaggtattcaaggccaactatggagcgaaacagtgcgcagtgatgat
gtggctgaatacatgatgtttcctcgtctgatgatgctagcagagcgtgcatggcacaag
ccagagtgggaagtgccatatcaataccaaggtgcggtttataatcagcaaagtggttat
ttcacgaaagagatgcgtcaagcacaagccaaagattggcaccgcgtggcaaacacctta
ggtgctaaagagctattaaagctagataaagcaggtattgcctatcgagtaccgacaccc
ggtgctgtcataaatgacggtaaattgtttgccaatgttattttcccaggacttagcatt
gaataccgtgatgctaaaggacagtggcaggcatattccgatggcgtaacggttaccgcg
cctgttgaggtgcgtgtgattgcggctgatggcaagcgtaaagggcgcattttagttgtt
aattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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