KEGG   Shewanella halifaxensis: Shal_1653Help
Entry
Shal_1653         CDS       T00654                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
shl  Shewanella halifaxensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:shl01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:shl00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:shl00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1983021..1983830)
Genome map
AA seq 269 aa AA seqDB search
MSNRYQAAFAALNEKNQGAFVPFVTLGDPSPELSLKIIDTLVENGADALELGFPFSDPLA
DGPVIQGANLRALAAGTTPSQCFEMLGTIRAKYPELPIGLLLYANLVFANGIDKFYGKCQ
AAGVDSVLIADVPVEEAAPFIASAKAHGVCPIFIAPPNADSETLKQVSEKGEGYTYLLSR
AGVTGTESKAGMPIGDILNRLKEFNGAPPLLGFGIAEPSQVKAAIDAGAAGAISGSAVVK
IIAANKDNEQALLSALGEFTRNMKAATSR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgagtaatcgttatcaggcagcctttgccgcccttaatgagaaaaaccaaggcgcattt
gtgccgttcgtgaccttaggcgacccatcacctgagctatcgctcaagatcatcgatacc
ttagtggaaaacggcgccgatgccctagagctaggctttccattctcagatccactagcc
gatggtccggttattcaaggtgcaaacctgcgcgcattagccgcaggcaccacgccatct
cagtgctttgagatgctaggcactattcgcgctaagtacccagagctacctatcggcctg
cttttatatgcaaacctcgtgtttgccaacggcatcgataagttttacggcaaatgccaa
gccgctggcgtcgattcggtattaattgccgacgtaccagtcgaggaagccgcgcctttt
atcgcatcagccaaggcccacggcgtgtgcccaatctttatcgcaccgcctaatgccgat
agcgagaccttaaagcaggtcagcgaaaaaggggaaggctacacttacctgttatcacgc
gcgggtgttactggcacagaatcgaaagcgggtatgccaattggcgacattctcaatcgc
ctaaaggagtttaatggtgcgccgccactactcggttttggtattgccgaaccttcgcag
gtcaaagcggccatcgatgcgggcgcagctggcgcgatttcaggttctgcggtggtaaaa
atcatcgcagccaataaagacaacgaacaagccttattaagcgctctcggtgaatttacc
cgcaatatgaaggcggcaacgtctcgctaa

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