KEGG   Shewanella halifaxensis: Shal_1936
Entry
Shal_1936         CDS       T00654                                 
Name
(GenBank) Radical SAM domain protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
shl  Shewanella halifaxensis
Pathway
shl00790  Folate biosynthesis
shl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:shl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    Shal_1936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:shl03016]
    Shal_1936
Enzymes [BR:shl01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     Shal_1936
Transfer RNA biogenesis [BR:shl03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Shal_1936
SSDB
Motif
Pfam: Radical_SAM Fer4_12 EcKL
Other DBs
NCBI-ProteinID: ABZ76501
UniProt: B0TSC1
Position
2328101..2328769
AA seq 222 aa
MKYPVNEVFETIQGEGTFTGVPAVFVRLQGCPVGCSWCDTKQTWELLEANHVAKELVIQV
DGTIGRWSELSAEELVNAFKDKGFNAKHIVITGGEPCLYDLTELTQYLHSQGYQTQIETS
GTFDVLCHADTWVTVSPKVNMKGGYKVLAQALNRANEIKHPIATQNHIDELDELLEGIDL
TDKTVCLQPISQKARATELAMSTCIARNWRLSIQTHKYLDID
NT seq 669 nt   +upstreamnt  +downstreamnt
atgaaatatccagtgaatgaagtatttgaaacaattcaaggtgaggggacttttacggga
gtaccagccgtttttgttagacttcagggctgccctgttggttgctcttggtgtgacact
aagcagacgtgggaattgctagaggcaaatcacgttgctaaagagcttgtgatccaagtt
gacggtactatcggccgttggtcggagcttagcgctgaagaattggttaatgcctttaaa
gataaaggctttaatgcaaaacatatcgtgatcacaggtggtgaaccttgtttatatgat
ttgacagagttaactcaatatcttcatagccaaggttaccaaacgcagattgaaaccagt
ggtacgtttgatgtgctttgtcacgcagatacttgggtgacagtatcacctaaggtcaat
atgaaaggtggttataaagtacttgcccaagcgctaaaccgggccaatgagattaaacac
ccgatagcaactcaaaatcacattgatgagcttgatgagctgttggaaggtatcgactta
accgataaaacggtttgcttgcagcctattagtcaaaaggcccgtgcgacagagttggca
atgtctacctgtatcgcacgtaactggcgcttatcgattcaaacgcataaatatttagat
atcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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