KEGG   Shewanella halifaxensis: Shal_3006
Entry
Shal_3006         CDS       T00654                                 
Name
(GenBank) small GTP-binding protein
  KO
K02355  elongation factor G
Organism
shl  Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:shl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:shl03012]
    Shal_3006
   03029 Mitochondrial biogenesis [BR:shl03029]
    Shal_3006
Translation factors [BR:shl03012]
 Eukaryotic type
  Elongation factors
   Shal_3006
 Prokaryotic type
   Shal_3006
Mitochondrial biogenesis [BR:shl03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    Shal_3006
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Ubiquitas transcription factors
    Shal_3006
SSDB
Motif
Pfam: EFG_IV GTP_EFTU EFG_III EFG_C GTP_EFTU_D2 MMR_HSR1 AAA_16 ABC_tran Dynamin_N nSTAND1 RsgA_GTPase AAA_29 DUF87 Septin YobI-ATPase AIG1 FtsK_SpoIIIE SMC_N iRhom1-2_N AAA_23 AAA_21
Other DBs
NCBI-ProteinID: ABZ77555
UniProt: B0TPA8
Position
complement(3649836..3651863)
AA seq 675 aa
MAEFTTEQIRNLAVLGHTGSGKSSLLEALLFRAEAITLKGRVDKGTNHADFTAQEKSHRH
SLEPSFLNLDYANHHINIIDTPGLPDFFGRALLPLPGVESVVLVIHAGVGIEAITKRAFE
AARRQGKAVLIVINHIDGNESALAPLLQTIQAQFGQRCLPVNLPNVTGDGVVDCYLHCDP
QAQTAFIGAECARDELVDTVLEEDELLMELYLEQGESLTPEQLHAPLETALRLGNLVPVC
FTSAEKEIGISSLLEILIKLMPNPLEANPPQFVKGFGDNAKAVTVNQNPNEHVLAHVFRV
AVDPFFGRMGVFRLYQGTINVGMKLYIGQGRKPFKVAHLIKLQGEKHIDVAQAIPGNIYA
IAKVEELEIGVVLHDSHDEDDFHMPENALPQPIFGLAVSPKRRGDEQKLSEVLNKLVAED
PSLRVTRGEALGQTLLQGQGDLHLQIALEKAQTVFNVDMETNIPAVPYRETILAEAKSRY
RHKKQSGGSGQFGEVELMVEPLARGQGFEFVSKVVGGSVPSQYIPAIEKGVREAMLAGGV
GGFPMQDIKVTVLDGKHHSVDSKEIAFVMAGKRAFMEAVTSAQPVILEPVVDMQICVEQG
YVGEITGDISASRGMVCGTQAQTNGMVEVSVEAPLANVADYSTRLKSMTGGEGQFSMSFS
RYDVVPDRVQATLMR
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggctgaatttactaccgagcagatccgaaatctggctgtgcttggacacactggatct
ggaaaatcttctctgttagaggcgcttctttttcgtgcagaggcgataacattaaaaggc
agggtcgataagggcactaatcacgctgatttcactgcccaagaaaaatctcaccgccat
agtttagaaccttcattcctcaatctcgattacgccaatcaccacatcaacatcatagac
acccctggattacctgacttctttggtcgagccttgttgccgttaccaggcgttgaatct
gttgttttggtgatccacgcaggggttggcatagaggcgataaccaaaagagccttcgaa
gctgcccgtcgtcaaggtaaagcggtactcatcgttattaatcatattgatggcaatgag
tcggcgttagcgcctttgctacaaacgattcaagcacagtttggtcagcgatgcttaccc
gttaacttgcctaatgttactggtgatggggtagtggattgctatttgcactgtgaccca
caagctcaaaccgcttttattggcgccgaatgtgcccgagatgaattggttgataccgtg
cttgaagaagatgagctgttaatggagctctatcttgagcagggcgaatcgttaacccca
gagcagctgcatgctccacttgaaacggcattacgcttaggcaacttagtcccagtttgc
tttaccagtgccgaaaaagagatagggatcagttcgctgttagagatccttattaaatta
atgcctaaccctctagaggctaacccaccgcaatttgtaaaaggttttggcgataacgct
aaagctgtcacagtcaatcagaatcctaacgagcacgtactcgcccacgtatttagggtc
gcagttgacccattctttgggcgtatgggggtatttcgtttatatcaaggcacaatcaat
gtggggatgaagctatatatcggtcaagggcgtaagccatttaaagtggctcacctgatt
aaattacaaggtgagaagcatattgatgtggctcaagcgataccagggaatatctatgcc
attgccaaagtcgaagagcttgagatcggtgtggtgttgcacgacagtcatgatgaagat
gattttcacatgccagagaacgcactacctcagcctattttcggcctagcagtttcccct
aaacgacgtggcgatgaacaaaagttatctgaggtgttgaataaacttgtggcagaagat
cccagtttgcgagtcactcgaggtgaagcactggggcaaactctgctgcaggggcaggga
gatctgcatctgcaaattgcgctagagaaggcgcaaactgtgttcaatgtggatatggaa
accaatatacctgcggtgccatacagagagaccatcttagccgaggcaaagtcacgttat
cgccataagaaacagtcgggaggctcagggcagtttggtgaagtcgagttgatggttgag
ccgttggcccgtggccaaggttttgagtttgtcagtaaagtggtgggtggttctgtgcca
agccaatatattccagcgatagagaaaggcgtgcgcgaagccatgttagcgggaggggta
ggtggtttcccgatgcaggatattaaagtcacagtattagatggtaaacatcatagcgtg
gattctaaggagatagcgtttgtcatggcgggcaagcgagcctttatggaggctgttacc
tcggcacaacctgtgatccttgagcctgtcgttgatatgcagatctgcgtagagcagggc
tacgttggggagatcaccggtgatatcagtgcttctagaggcatggtgtgcggcactcag
gcgcaaaccaatggtatggttgaggtgagtgtggaagcgccgcttgcaaatgttgccgac
tattctactcgattaaaatcgatgactggaggagaggggcagttctcaatgagctttagc
cgttatgatgtggttcccgatagggtacaggctacattaatgcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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