KEGG Shewanella_MR-7: Shewmr7

Shewanella sp. MR-7: Shewmr7_0015

Entry

Shewmr7_0015 CDS Shewanella_MR-7

Gene name fadA

Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)

Orthology K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]

Pathway shm00071 Fatty acid metabolism
shm00280 Valine, leucine and isoleucine degradation
shm00281 Geraniol degradation
shm00362 Benzoate degradation via hydroxylation
shm00592 alpha-Linolenic acid metabolism
shm01100 Metabolic pathways

Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:shm00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:shm00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:shm00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:shm00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:shm00281]

SSDB

Motif Pfam: Thiolase_N Thiolase_C ketoacyl-synt
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3

Other DBs NCBI-GI: 114045528
NCBI-GeneID: 4258048
JGI: Shewmr70015
UniProt: Q0I0T4

Position complement(18689..19852)

AA seq 387 aa
MKQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQ
TLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEH
MGHVPMNHGVDFHPGLANNVAKASGMMGLTAEMLGKLHGISREQQDAFAVRSHQRAHAAT
VEGRFAKEIYAIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSA
LSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVN
DLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM
EHKDATLGLATMCIGLGQGIATVFERV

NT seq 1164 nt +upstreamnt +downstreamnt
atgaaacaagctgttatcgtagattgcattcgtactcctatgggccgttctaaggctggg
gtgttccgtaatgtacgtgcagaaacactctctgccgaattaatgaaaggtctattactg
cgtaacccgcaattagatcccaatgctattgaagacgtgatttggggctgcgtgcagcaa
accctagagcaaggcttcaacattgcccgtaatgcatcattgctggctggtattccaaag
acggctggcgcagtgacagtcaaccgcctatgcggttcttcaatggaagccatccaccaa
gccgcacgcgcaatcatgactggcatgggcgatacctttattattggtggtgttgaacat
atgggccacgtgccaatgaaccatggtgttgacttccacccaggtttggccaataacgtc
gccaaagcgtctggcatgatgggcttaaccgctgagatgttgggtaagcttcacggcatc
agccgtgagcagcaagatgcctttgcagtgcgttcacaccaacgcgctcacgctgccaca
gttgaaggccgctttgccaaggaaatctatgccatcgaaggccatgatgctaacggcgcg
ctgattaaagtgctgcacgacgaagtgattcgtccagaaacctcaatggaatcattagcg
gcgctgcgcccagtattcgacccagcaaacggtacagtgactgccggtacctcttcagca
ttatctgacggcgcttcggctatgttagtcatggaagagtctaaagcacgcgctttaggt
ctaccaatccgtgcccgtatccgctcaatggcggttgcaggttgtgacgcggcaatcatg
ggttacggtccagtacctgctacgcaaaaagctctggctcgcgcaggcatcacagttaat
gatttggatgttatcgaactgaacgaagcctttgccgcgcaatctttaccctgcgtgaaa
gatttaggcctgttggatgtggtcgatgagaagattaacctcaacggtggtgctatcgca
cttggccatccactgggttgctctggtgcgcgtatttcgacgacgctgatcaacctgatg
gagcacaaagatgcgaccttaggtttagccactatgtgtatcggtttaggccaaggtatt
gcgaccgttttcgaacgcgtttaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SHM (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (3)   
   PROSITE (4)   
All databases (24)

DBGET integrated database retrieval system