KEGG   Shewanella sp. MR-7: Shewmr7_0016Help
Entry
Shewmr7_0016      CDS       T00389                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
shm  Shewanella sp. MR-7
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:shm00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Shewmr7_0016 (fadB)
   01212 Fatty acid metabolism
    Shewmr7_0016 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Shewmr7_0016 (fadB)
   00650 Butanoate metabolism
    Shewmr7_0016 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Shewmr7_0016 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Shewmr7_0016 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Shewmr7_0016 (fadB)
   00310 Lysine degradation
    Shewmr7_0016 (fadB)
   00380 Tryptophan metabolism
    Shewmr7_0016 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Shewmr7_0016 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Shewmr7_0016 (fadB)
   00281 Geraniol degradation
    Shewmr7_0016 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Shewmr7_0016 (fadB)
Enzymes [BR:shm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Shewmr7_0016 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Shewmr7_0016 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Shewmr7_0016 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Shewmr7_0016 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(19875..22025)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRHRKMSPLTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVVEQAATKGRSDALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVNHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaaacaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaacgccgtattcaacaaactcgaagat
ttacctttcccaaccgcttcagcgattaaaggtttcgccctaggcggcggttgtgaaact
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggcctgcccgaaacc
aaactgggcattatcccaggctttggtggcacagtgcgtttaccacgtgtgattggtgcg
gataacgcccttgagtggatcaccacgggtaaagatcagcgtccagaagatgccttaaaa
gtcggtgcggttgatgctgttgtcgcgccagaggctttagaagccgccgccattcaaatg
ctaaaagatgcagttgcagaaaagcttgattggcaagcccgtcgccaccgtaagatgtca
ccactgaccctaccaaaactcgaagccatgatgtctttcactaccgctaaaggcatggtg
tttgcggttgcgggtaaacactacccagcaccaatggcggcagtcagcgtagttgaacaa
gcggcgaccaaaggccgcagcgacgcactgcaaattgaacatcaagcgtttatcaagtta
gcgaaaaccgatgttgccaaggcgttgatcggtatcttcttgaatgaccaattagtcaaa
ggcaaggccaagaaagcgggcaaactcgccaaagatgtgaaaagcgccgccgtattaggt
gctggcatcatgggtggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaggatatcgctcaacctgcattagatttaggtttaggcgaagccgctaaactgtta
tctgcacaagttgctcgcggccgctctaccccagaaaaaatggctaaggtgctgaacaac
atcactccagccttagactatgctccagttaaccatgctgacgtggttgtcgaagccgta
gttgagcatccaaaagtgaaggcacaagtactggctgaagtagagcaatacgtgagtgaa
gatgcgattatcgcctctaacacgtcaactatttcaatcaacctgctcgcgaagagcatg
aagaagcctgagcgtttctgcggtatgcacttcttcaacccagtgcacaaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgttgcctac
gccagcaaaatgggtaaaaccccaatcgttgttaacgattgcccgggtttcttcgttaac
cgcgtactcttcccttactttgcgggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgataaagtgatggaaaaacaattcggctggccaatgggtcctgcttacctg
ctagacgttgtcggcctagacacgggtcaccacgcgcaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaatctggcaatgacgcgattgacgtgatgtttgagaacaagcgt
ctcggtcagaagaatggtaaaggtttctacgcttactctgtagatagccgtggtaaacca
aagaaagatgtcgacccaaccagctacgagctgctgaaggccgcctttggtgagcaaaaa
gcattcgatgcggatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcatcacctgccgaagcggatatgggcttggtatat
ggtttaggtttccctccattccgtggtggtgtattccgttacttagatactatgggcgta
gcgaactttgtcgccttagctgataaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgcgcccttgcagccaacaacggtagctactaccaagcctaa

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