KEGG Shewanella_MR-7: Shewmr7

Shewanella sp. MR-7: Shewmr7_1995

Entry

Shewmr7_1995 CDS Shewanella_MR-7

Definition L-arabinose isomerase (EC:5.3.1.4)

Orthology K01804 L-arabinose isomerase [EC:5.3.1.4]

Pathway shm00040 Pentose and glucuronate interconversions
shm01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose and glucuronate
interconversions [PATH:shm00040]

SSDB

Motif Pfam: Arabinose_Isome Arabinose_Iso_C

Other DBs NCBI-GI: 114047491
NCBI-GeneID: 4258681
JGI: Shewmr71995
UniProt: Q0HV71

Position complement(2359095..2360597)

AA seq 500 aa
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREI
HAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNY
MNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDWCRAAAGWHESQNLRIAR
FGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIAAIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANG
FGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAA
KPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNRFRIILNELDTVTPPQDLPNL
PVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL

NT seq 1503 nt +upstreamnt +downstreamnt
atgaaagccttcaaacaaaaacaagtgtggtttatcacgggttcgcaggatttatacggc
ccaaaagtattagagcaagtcgctaaaaacagtgagcaaattgttcatggctttaatgaa
tcatccgccatttccatcgaagtggtgtataagccaaccgtaaaatctccacgggaaatt
catgccgtatgccaagcggccaacagcgatgaaaactgtgttggcgttattctgtggatg
cacactttctctccagccaagatgtggattgctggccttaatgaattaagcaagccattc
atgcacttacacactcagttcaatgccgagctcccttggagtgaaatcaacatgaactac
atgaacacccaccaaagtgctcacggttgccgcgaatttggttttatcggcactcgtatg
cgtaaagagcgcaaagtggttgtgggtcactggcaatcgagcgatgtacaggcacaaatc
gatgattggtgccgcgcggcggcgggttggcacgagagccaaaacctgcgtatcgcccgc
tttggcgacaacatgcgtcaagtggccgtgaccgaaggcgacaaagttgccgcacaaatt
caattcggttacgaagtgcacgcctacagcttaggtgaactcaatgaggcgattgcagcc
attgccgaaggcgatgtgactgcacagctcgaccgttacgccagcgaataccaagtgggt
aacgagctatttggcgatgaataccaattagaccgtttaagaaaagaagccaagattgaa
ctcggcttaacccaattcttaacccaaggcggatttggtgcctttaccaactgcttcgaa
aacctcaccggtatgacaggattaccaggactggctacccaacgtctgatggcgaacggt
ttcggttacggcggtgaaggtgactggaaaacggctgccatggtgcgcatcatgaaggtg
atgggccaaggccgtgccggtggtacttcatttatggaagactacacctataactttggc
gcgactgaccaagttcttggcgcccacatgttagaagtgtgcccatcgattgctgctgca
aaaccgcgtttagaagttcaccgccacaccattggtgtgcgttgtgacgtgccacgtctg
ttattcactggtaaagcaggcccagcaattaacgtatcgactatcgatttaggcaatcgt
ttccgtatcattcttaatgaattagatacagtaacgccaccacaggatctgccaaatctg
cctgtcgcgtctgcgctgtgggagccgcgtccgaatttagcggttgccgccgcagcttgg
atccacgccggtggtgctcaccactcagcttacagccaagctatcacgacggatcagatt
gtcgactttgctgaaatggccggtgctgaactggttatcatcgatgccgacactaagatc
cgtgagtttaagaatgagcttcgccaaaattccgtttattacggtttagcaagaggttta
taa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-SHM (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)

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