KEGG T00428: Shewana3

Shewanella sp. ANA-3: Shewana3_1710

Entry

Shewana3_1710 CDS T00428

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

shn Shewanella sp. ANA-3

Pathway

shn00020	Citrate cycle (TCA cycle)
shn00310	Lysine degradation
shn00380	Tryptophan metabolism
shn01100	Metabolic pathways
shn01110	Biosynthesis of secondary metabolites
shn01120	Microbial metabolism in diverse environments

Module

shn_M00009	Citrate cycle (TCA cycle, Krebs cycle)
shn_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:shn00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:shn00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:shn00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2012652..2015471

AA seq 939 aa
MHQGIMKAWLESSHLSGANSTYVEEMYEAYQEDPQSVSDDWRAVFDNLPPVNGASKDAPE
AAHSKVRDYFRSLAMDGRHKSAARVTDPELDAKQVKVLQLINAHRFRGHQGANLDPLELW
KREPVADLDPAFHGLTKEDMEREFNTGSFAHGGETMKLADLVKALKATYCGSIGAEYMHI
TDTDEKRWIQQRLEPSLGKANYDKSVKTRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNVLVNVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARQDRRGCKDGLQVMPIT
IHGDSAIAGQGIVQETFNMSQTRGFKVGGSIRIVVNNQVGFTTSNHFDVRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENSIGADEVTSMINTYRDALDQGDCVVKEWRPMTLHTVDW
TPYIGREWDEVYQASLPLERLQNLADKLSYVPESHPLHSRVAKIYGDRVAMAKGEKLLDW
GFAETLAYATILEDNKRVRITGQDSGRGTFFHRHAVLHNQNDATTYMPLRNLSEDQGPID
ITDSVLSEASVLAFEYGYTTAEPGGLAIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSSMEELANGTFQNVIGEIDTLEASKVDRVVFCSGKVYFELLEKRR
KENINNIAIIRVEQLYPFPHEEMVAALADYQHVTDFVWCQEEPQNQGAWYSSQHHFWAAI
PAGAKLTYAGREASAAPACGYPELHAHQQESLVNSALKL

NT seq 2820 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgaatcatctcacttaagtggtgcaaattcg
acctacgtagaagagatgtatgaagcctatcaagaagacccacagtcagtctctgacgat
tggcgtgcggtatttgataatctccctccggtgaacggtgcttctaaagacgcgcctgaa
gcggctcactccaaagtacgtgattattttcgcagtttagcgatggacggacgtcataag
agcgcagctcgtgtgaccgatcctgagttggatgctaagcaagttaaagtgctacagctg
atcaacgcccaccgtttccgtggtcaccaaggggctaacctcgacccgttagaattgtgg
aaacgtgaacctgttgccgatttagatcccgcattccacggtctgaccaaagaagacatg
gaacgtgagttcaacactggctcgttcgcccacggcggcgaaaccatgaagctggctgac
ttagtcaaagcgctaaaagccacttactgtggttcgattggcgccgaatacatgcacatt
accgataccgatgagaagcgttggatccaacaacgtctcgaaccatccttaggtaaagcc
aactacgataaaagcgttaagacccgcattctcgaaggcctaaatgctgctgaaggcatt
gaaaaatatttaggcgctaaattccctggtgcaaaacgcttctcgttagaaggcggcgat
gcgttagtccctatgatgcgcgaaatcatttaccgcgcaggcgaagcgggcactaaagaa
atcgtagtcggtatggctcaccgtggtcgtttaaacgtactggtgaacgtgttaggtaag
cgtccagcagaactgtttgacgagttcgccggtaagcacgccgatacccacggttcaggc
gacgtaaaataccaccaaggcttctcttcagatttcgaaacgccgggcggcaacgtgcac
ttagcactggcctttaacccatcacaccttgaaatcgttaaccctgtggttatgggctct
gtccgtgctcgtcaagaccgccgtggttgtaaagacggtttacaggtgatgccaattacg
attcacggtgactctgcaattgctggtcaaggtatcgtgcaagagacattcaacatgtct
caaacccgtggctttaaagtgggcggaagcatccgtatcgttgtaaacaaccaagttggt
tttacaacgtcaaaccactttgatgtgcgttcaactgaatactgtactgacatcgctaag
atggttcaggcaccgattttccacgtgaactctgacgatccagaagccgttgcctttgtt
gctcagcttgctgttgattaccgtaacgagtttaaacgtgacgtggtgattgacttagtg
tgttaccgtcgtcatggccacaacgaagctgacgagccaagtgcaactcagccattgatg
tatgccaagatcaagaaacacccaacgccacgtaagatctacgctgacaaactgatcgct
gaaaacagcatcggcgctgatgaagtgaccagcatgatcaacacctaccgtgacgcctta
gaccaaggtgactgtgtggtgaaagaatggcgcccaatgacactgcacacagtggattgg
actccttacattggccgtgagtgggacgaagtgtatcaagcatctctaccacttgagcgt
ctgcaaaatctggctgacaagctcagctacgtgccagagagccacccactgcattcacgc
gttgctaagatttacggcgatcgcgttgctatggcgaagggcgagaaattactcgactgg
ggctttgctgaaaccttagcgtacgccacgattcttgaagacaacaagcgcgttcgcatt
acgggtcaagactctggccgtggtactttcttccaccgtcacgcggttctgcacaaccaa
aacgatgcaaccacctatatgccgctgcgcaacttgtctgaagaccaaggtccaatcgac
atcacagactcagtattgtctgaagcgtcagtactggccttcgaatacggctacaccaca
gcagagcctggtggtctggcgatttgggaagctcaattcggtgacttcgctaactgtgcg
caagtggttatcgaccagttcctgtcgtctggtgagcagaagtggggccgtttatgcggt
ttgaccatgctgttaccacacggttacgaaggtcaaggtccagaacactcaagtgcccgt
ttagagcgtttcttgcagctgtgtgctaaccacaacatgcaagtgtgtgtgccatcaacg
ccagcacaggtttaccatatgctgcgtcgccaagtggtgcgcccaatgcgtcgtccactg
gtggtgatgtcacctaagtcattgctacgtcacccattagcggtttctagcatggaagaa
ttggctaatggcaccttccaaaacgtgatcggtgaaatcgatacgttagaagcgagcaaa
gtcgatcgcgtcgtgttctgtagcggtaaggtgtacttcgagctactggaaaaacgccgt
aaagaaaacatcaacaacatcgcaataatccgtgtcgaacagttatatccgttcccacat
gaagaaatggttgcagccttagctgactaccaacatgtgaccgattttgtatggtgtcag
gaagagccgcaaaaccagggtgcttggtactctagccaacatcacttctgggctgctatc
cctgcgggtgcaaaactgacctatgctggccgtgaagcatctgctgcaccagcctgtggt
taccctgagctgcatgctcaccaacaagaatctttagtgaacagtgccctaaagctgtaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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