KEGG T00428: Shewana3

Shewanella sp. ANA-3: Shewana3_1750

Entry

Shewana3_1750 CDS T00428

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

shn Shewanella sp. ANA-3

Pathway

shn00020	Citrate cycle (TCA cycle)
shn00480	Glutathione metabolism
shn01100	Metabolic pathways
shn01110	Biosynthesis of secondary metabolites
shn01120	Microbial metabolism in diverse environments
shn01210	2-Oxocarboxylic acid metabolism
shn01230	Biosynthesis of amino acids

Module

shn_M00009	Citrate cycle (TCA cycle, Krebs cycle)
shn_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:shn00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:shn00480]

SSDB

Motif

Pfam:

IDH DUF4115

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2063884..2066109

AA seq 741 aa
MKDNSPTIIYTETDEAPALATLSLLPIIKTFTDAAGVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWTKESQSHVAHMSE
GDFYGSEQSVTLANADTVNIVLSQKDGQEVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EIANAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHASLFAELGVDVNNGFG
DVYAKIASLPADVRAQIEADIAAVYAERPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIAKVKQYLPEHDTDGLDISIMSPEEATRFSLVRIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTKDEQLQAHFIPLAHALSANEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA

NT seq 2226 nt +upstreamnt +downstreamnt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcaccagcgctagca
acgctttctctgttacctatcatcaaaacctttaccgatgcggcgggtgttgcggttgaa
acccgtgatatttctttatcgggccgtgtgattgctaatttccctgaaaaactgactgac
gcgcaaaagattggcgatcacttagctgagctgggtgaattagcgaaccaacctgaagct
aacatcatcaaactgccaaacatcagtgcgtcaatcccgcagttaaaagcttgtatttta
gagcttcaacagaaaggttacgacattccaaattatcctgacgagccaaagactgacgaa
gaaaagtctatcaaagcgcgttacgacaagatcaaaggcagtgcggtaaaccctgtactg
cgtgaaggtaactctgatcgccgcgcgccgctgtcagtgaaaaacttcgctaagaaaaac
ccacactcaatgggtaagtggaccaaagagtctcaatcacacgttgctcacatgagcgaa
ggtgacttctacggtagcgagcagtctgtgacgctggctaacgctgacacagttaacatc
gtactgtcgcaaaaagacggtcaagaagtggtattgaaatctggcctgaaactgctggct
ggtgagatcatcgacgcgtcagtgatgagcaaaaaagccctagttagcttctttgagcgt
gagatcgccaatgccaaggccgaaaacgtgttgttatcactgcaccttaaagccaccatg
atgaaagtgtccgatccgattatgttcggtcacgcagtcaaagtattcttcaaacctgtg
tttgataaacatgcgtcattatttgctgagctaggcgttgatgtgaacaacggctttggc
gatgtatatgccaaaatcgctagtttacctgccgatgttcgtgcacaaattgaagccgat
atcgccgccgtttatgctgagcgcccagcgctggcgatggtagattctgacaaaggcatc
accaacttacacgtaccaagcgacatcattatcgatgcttctatgccagcggccattcgt
tcatcaggccaaatgtggggtcctgatggcaaattgcacgatactaaagcgctgatccca
gaccgttgctacgcgggtgtgtatcaagaaaccatcgctttctgtaaagagcatggtgcc
ttcgatccaagcactatgggtagcgtgccaaacgtgggtctgatggcgcaaaaagccgaa
gaatatggtagccacgataaaaccttcgaaatcccagcggatggcgtggttaacgtgatt
gatgccagtggcaaagtgttaatgagccacaacgtcgaagcgggcgatatttggagaatg
tgccaagttaaagacgctccaattcgcgactgggtgaaattagctgtacgccgtgcacgt
ttaagcaatactcctgcggtattctggttagatgcgaatcgcgcccacgatgcgcagctg
atcgctaaagtgaagcaatatctacctgagcatgatactgacggtttagacatcagcatc
atgtcaccagaagaagcgactcgtttctcattagtgcgcattaaagaaggtaaagatact
atttctgttaccggtaacgtactgcgtgactacctgactgacttgttcccaatcctcgaa
ctgggtaccagtgctaagatgctgtctatcgtaccattaatgaatggtggcggcctgttc
gaaacgggtgcgggcggtagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggactcattaggtgagttcctggctttagcggcttctttagagcatttaagc
caaactgtgggtaatcctaaggcacaagtactggcagataccttagatcaagccatcggt
cagttcttagatagcaacaagtcgccatcaagacgcgttggtgagctggataaccgtggt
agtcatttctatctggcgatgtactgggcacaagcgttagccgctcaaaccaaagacgag
cagttacaagctcactttattccattagcgcacgcgttaagcgcaaatgagcaagtgatt
gttgctgagctaaacaatgcgcaaggtgcgccagtggatttaggcggttactatcgttta
gacgccgcaaaagctgaaaaagccatgcgcccaagcgagacactgaacaagctattaatt
gcttaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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