KEGG   Shewanella sp. ANA-3: Shewana3_3590
Entry
Shewana3_3590     CDS       T00428                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
shn  Shewanella sp. ANA-3
Pathway
shn03030  DNA replication
shn03430  Mismatch repair
shn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Shewana3_3590
   03430 Mismatch repair
    Shewana3_3590
   03440 Homologous recombination
    Shewana3_3590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shn03032]
    Shewana3_3590
   03400 DNA repair and recombination proteins [BR:shn03400]
    Shewana3_3590
   03029 Mitochondrial biogenesis [BR:shn03029]
    Shewana3_3590
DNA replication proteins [BR:shn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Shewana3_3590
DNA repair and recombination proteins [BR:shn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Shewana3_3590
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Shewana3_3590
Mitochondrial biogenesis [BR:shn03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Shewana3_3590
SSDB
Motif
Pfam: SSB Lin-8 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABK49812
UniProt: A0L193
Position
complement(4310551..4311258)
AA seq 235 aa
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGGRNQGQS
QGQGQGAPMGGMQQNAGYQAAPAQTAPAQNQYAPAQQSYQAPAQQPQSGYNQQPAQQSYG
QQQQSHAQPQQSGYAPKPAAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq 708 nt   +upstreamnt  +downstreamnt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtacgttacatgccaaacggtaacgcagtcgctaacatcacagtagcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttt
ggcaagttggctgaaattacgggtgagtacctgcgtaaaggttcacaggtttacctcgaa
ggtaaactgcagacgcgtaagtggaaagaccaaagcggtcaagatcgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgttaggtggtcgcaatcaaggccaaagt
caaggtcaaggccaaggtgcacctatgggtggcatgcaacaaaacgcgggttaccaagcg
gctccggctcaaactgcgccagcgcaaaaccaatacgcgccagcacagcaaagttaccaa
gcacctgcacagcagccacaatctggctacaatcagcagcctgctcagcaaagctatggc
cagcaacagcaatcccatgctcagccacagcaaagtggttatgcgcctaagcctgctgca
ccagcctatcaagcaccagcggcacctgcacaacgtccagcaccacagccacaacaaaac
tttaccccagatttggatgacggttgggacgacgatatcccgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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