KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_1851Help
Entry
SHJGH_1851        CDS       T02531                                 

Definition
putative ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sho00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SHJGH_1851
   03420 Nucleotide excision repair
    SHJGH_1851
   03430 Mismatch repair
    SHJGH_1851
   03450 Non-homologous end-joining
    SHJGH_1851
Enzymes [BR:sho01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SHJGH_1851
DNA repair and recombination proteins [BR:sho03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SHJGH_1851
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2236424..2237446
Genome map
AA seq 340 aa AA seqDB search
MTVSGVVEISAVTAVTLPLIPPMLATPGSLPPAAQDARWAYETKQDGQRVMVYLPGDGSV
LLRARSGEDITGAYPELRPLGGALGSTPAVLDGEVLALDARGRADFQLLQSRMGLAHAPA
RAARRAAQVPVHLVLFDVPHLEESLVRLPYVRRRARLEELALAGPYWSTPGAVTGHGAEA
LAATREHGLEGLVCKRLDSVYEPGVRSRAWIKIRNMRAEDVIVGGWLPGKGRLTGLPGAV
LVGQRDPEGRLRYVGGVGTGWSEAERVRLADLLRDTASDRCPFEPVPRVPGARWVLPRLV
GEVSYSTRTRNGMLRQPSWLRLRPDLTPEESAADLPGESG
NT seq 1023 nt NT seq  +upstreamnt  +downstreamnt
gtgacggtgtcgggggtggtcgagatctctgccgtgaccgccgtgaccctgccgctcatt
ccgccgatgctcgcgacgcccggcagcctgccgcccgccgcgcaggacgcgcggtgggcg
tacgagaccaagcaggacggccagcgggtgatggtgtacctgccgggcgacggcagtgtg
ctgctgcgcgcccgctcgggcgaggacatcaccggcgcctacccggagctccggccgctc
ggcggggcgctgggcagcacacccgcggtgctggacggggaggtgctggccctggacgcg
cggggccgggccgacttccagctcctccagagccggatgggcctcgcgcacgcccccgcg
cgggcggcgcgccgggccgcgcaggtcccggtgcacctggtgctgttcgacgtgccccat
ctggaggagtccctggtacggctgccatacgtccggcggcgggcgcggctggaggaactg
gcgctcgcggggccgtactggtcgacgccgggagcggtgaccgggcacggtgccgaggca
ctcgcggcgaccagggaacacggcctggagggcctggtgtgcaagcggctggactcggtg
tacgaacccggcgtgcgctcccgcgcctggatcaagatccggaacatgcgggccgaggac
gtgatcgtcggcggctggctgcccggcaaggggcggctgaccggactgcccggcgcggta
ctggtcggccagcgcgacccggagggcaggctgcggtacgtcggcggggtgggcaccggc
tggagcgaggccgagcgggtccggctggcggacctgctgcgggacacggcgagcgaccgg
tgccccttcgagcccgtgccgcgcgtgcccggcgcccggtgggtgctgccccggctggtg
ggcgaggtcagctacagcacccgtacccggaacggcatgctgcgccagccctcctggctg
cggctgcgcccggatctcactccggaggagtctgcggccgacctgcccggggaatccggc
tga

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