KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_6450Help
Entry
SHJGH_6450        CDS       T02531                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sho00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SHJGH_6450
Enzymes [BR:sho01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SHJGH_6450
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SHJGH_6450
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
7303903..7304763
Genome map
AA seq 286 aa AA seqDB search
MPELPEVEVVRRGLERWVAHRTVAETEVLHPRAVRRHVAGADDFAHRLKGHHIGTPRRRG
KYLWLPLEETNQSVLAHLGMSGQLLVQPHETADEKHLRIRVRFADSLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFHQALRRKRTTIKRALLDQSLISGVGNI
YADEALWRARIHYERPTANFTRPVTAELLGHIRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCRRCGTPMRRRPWMNRSSYFCPTCQRAPRVSS
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagttgcccgaggtcgaagtcgtccgccggggcctggagcgctgggtcgcccac
cggaccgtcgccgagaccgaggtgctgcacccgcgagccgtacgccggcacgtcgccggg
gccgacgacttcgcgcaccggctcaagggccaccacatcggcacgccccggcggcgcggc
aagtacctgtggctgccgctggaggagacgaaccagtccgtcctcgcccacctcggcatg
agcggacagctactggtccagccgcacgagacggcggacgagaagcacctgcgcatccgc
gtgcggttcgccgactccctaggcaccgaactccgcttcgtcgaccagcgcaccttcggc
gggctgtcgttgcacgacaacacccccgacggcctgcccgacgtcatcgcgcacatcgcc
cgcgacccgctggacccgctcttcgacgacgaggccttccaccaggcgctgcgccgcaag
cggaccaccatcaagcgggccctgctggaccagtcgctgatcagcggcgtcggcaacatc
tacgcggacgaggccctgtggcgcgcccgcatccactacgaacgccccacggcgaacttc
acccgcccggtcacggcggaactcctcggtcacatccgggacgtgatgaacgcggccctc
gccgtcggcggcaccagcttcgacagcctgtacgtcaacgtcaacggcgaatccggctac
ttcgaccgttccctggacgcctacggccgggagggcgagccctgccgccgctgcggcacc
cccatgcgccggcgcccctggatgaaccggtccagctacttctgccccacgtgtcagagg
gcgccgcgcgtctcgtcgtaa

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