KEGG   Shigella sp. PAMC 28760: A0259_13110
Entry
A0259_13110       CDS       T04390                                 
Name
(GenBank) long-chain fatty acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
shq  Shigella sp. PAMC 28760
Pathway
shq00061  Fatty acid biosynthesis
shq00071  Fatty acid degradation
shq01100  Metabolic pathways
shq01212  Fatty acid metabolism
shq02024  Quorum sensing
Module
shq_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:shq00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    A0259_13110
   00071 Fatty acid degradation
    A0259_13110
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A0259_13110
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:shq01004]
    A0259_13110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shq04147]
    A0259_13110
Enzymes [BR:shq01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     A0259_13110
Lipid biosynthesis proteins [BR:shq01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   A0259_13110
Exosome [BR:shq04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   A0259_13110
  Exosomal proteins of breast cancer cells
   A0259_13110
SSDB
Motif
Pfam: AMP-binding AMP-binding_C Pept_S41_N AMP-binding_C_2
Other DBs
NCBI-ProteinID: AMR23504
Position
complement(2613914..2615632)
AA seq 572 aa
MTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVM
TFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYT
PRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVK
YIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHR
NMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIP
GLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLT
GQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCV
KGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNE
IEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKL
VEFRDELPKSNVGKILRRELRDEARGKVDNKA
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgacgacgaacacgcattttagaggtgaagaattgaagaaggtttggcttaaccgttat
cccgcggacgttccgacggagatcaaccctgaccgttatcaatctctggtagatatgttt
gagcagtcggtcgcgcgctacgccgatcaacctgcgtttgtgaatatgggggaggtaatg
accttccgcaagctggaagaacgcagtcgcgcgtttgccgcttatttgcaacaagggttg
gggctgaagaaaggcgatcgcgttgcgttgatgatgcctaatttattgcaatatccggtg
gcgctgtttggcattttgcgtgccgggatgatcgtcgtaaacgttaacccgttgtatacc
ccgcgtgagcttgagcatcagcttaacgatagcggcgcatcggcgattgttatcgtgtct
aactttgctcacacactggaaaaagtggttgataaaaccgccgttcagcacgtaattctg
acccgtatgggcgatcagctatctacggcaaaaggcacggtagtcaatttcgttgttaaa
tacatcaagcgtttggtgccgaaataccatctgccagatgccatttcatttcgtagcgca
ctgcataacggctaccggatgcagtacgtcaaacccgaactggtgccggaagatttagct
tttctgcaatacaccggcggcaccactggtgtggcgaaaggcgcgatgctgactcaccgc
aatatgctggcgaacctggaacaggttaacgcgacctatggtccgctgttgcatccgggc
aaagagctggtggtgacggcgctgccgctgtatcacatttttgccctgaccattaactgc
ctgctgtttatcgaactgggtgggcagaacctgcttatcactaacccgcgcgatattcca
gggttggtaaaagagttagcgaaatatccgtttaccgctatcacgggcgttaacaccttg
ttcaatgcgttgctgaacaataaagagttccagcagctggatttctccagtctgcatctt
tccgcaggcggagggatgccagtgcagcaagtggtggcagagcgttgggtgaaactgaca
ggacagtatctgctggaaggctatggccttaccgagtgtgcgccgctggtcagcgttaac
ccatatgatattgattatcatagtggtagcatcggtttgccggtgccgtcgacggaagcc
aaactggtggatgatgatgataatgaagtaccaccgggtcaaccgggtgagctttgtgtc
aaaggaccgcaggtgatgctgggttactggcagcgtccggatgctacagatgagatcatc
aaaaatggctggttacacaccggcgacatcgcggtgatggatgaagaagggttcctgcgc
attgtcgatcgtaaaaaagacatgattctggtttccggttttaacgtctatcccaacgag
attgaagatgtcgtcatgcagcatcctggcgtacaggaagtcgcggctgttggcgtacct
tccggctccagtggtgaagcggtgaaaatcttcgtagtgaaaaaagatccatcgcttacc
gaagagtcactggtgaccttttgccgccgtcagctcacgggctacaaagtaccgaagctg
gtggagtttcgtgatgagttaccgaaatctaacgtcggaaaaattttgcgacgagaatta
cgtgacgaagcgcgcggcaaagtggacaataaagcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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